Arthrobacter agilis: NCTC2676_1_00960
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Entry
NCTC2676_1_00960 CDS
T07056
Symbol
pnp
Name
(GenBank) Polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC2676_1_00960 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aagi03019
]
NCTC2676_1_00960 (pnp)
03016 Transfer RNA biogenesis [BR:
aagi03016
]
NCTC2676_1_00960 (pnp)
Enzymes [BR:
aagi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NCTC2676_1_00960 (pnp)
Messenger RNA biogenesis [BR:
aagi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NCTC2676_1_00960 (pnp)
Transfer RNA biogenesis [BR:
aagi03016
]
Prokaryotic type
tRNA degradation factors
NCTC2676_1_00960 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
KH-I_KHDC4-BBP
RNase_PH_C
KH_PNO1_2nd
S1_RRP5
PCB_OB
KH_2
KH_KhpA-B
Motif
Other DBs
NCBI-ProteinID:
VDR31685
LinkDB
All DBs
Position
1:1042477..1044783
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AA seq
768 aa
AA seq
DB search
MPIASDTHTDTETEVTLLEGPEIEFAEAVIDNGRFGTRTVRFETGRLAQQAAGSAMVYID
EDTALLSATTAGKHPREGFDFFPLTVDVEERMYAAGRIPGSFFRREGRPSTEAILACRLM
DRPLRPAFVKGLRNEVQVVVTILAINPDVRYDVVAINAASMSTQLSGLPFSGPIGGVRVA
LVSDGSGNDQWIAFPKHSELENSVFDMVVAGRIAGDDVAIMMVEAEATDNSWNLIKENGA
TAPTEEIVADGLEAAKPFIRALCEAQADLASRAAKPTVEFPVFLDYQDDVYSAIESAGSD
KLAQVFQIADKQERESASDALKAELLDTLGSQFEGREKELSAAFRSLTKAVVRQRILKDQ
VRIDGRGLSDIRKLTAEVEVLPRVHGSAIFERGETQIMGVTTLNMLKMEQQIDSLSPVTR
KRYMHNYNFPPYSTGETGRVGSPKRREIGHGALAERALVPVLPTREEFPYAIRQVSEALS
SNGSTSMGSVCASTLSLLNAGVPLRAPVAGIAMGLVSDEVDGQTRYAALTDILGAEDAFG
DMDFKVAGTSEFVTAIQLDTKLDGIPASVLAAALKQAREARLHILGVLQAAIDTPDELSE
FAPRIISVKIPVDKIGEVIGPKGKMINQIQEDTGADISIEDDGTVLIGATNGESAEAARA
AVNAIANPQVPEIGERYLGTVVKTTTFGAFVSLTPGKDGLLHISELRKLAGGKRVDNVDE
VVSVGQKVQVEITKVDDRGKLSLSPVVADEAGDSEDAGIELPEVAEAN
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
gtgccgattgcctccgacacccatacagacacagaaacggaggtgactctcttggagggt
cccgaaattgaattcgccgaagcagtgatcgacaacggtcgcttcggcacacgcaccgtc
cgcttcgagaccgggcgtctcgcccagcaggccgcagggtccgccatggtctacatcgac
gaggacaccgcgctgctctcggccaccacggccggcaagcacccgcgcgagggcttcgac
ttcttccccctgacggtggacgtcgaagagcgcatgtacgccgcgggccgcatcccgggc
tcgttcttccgccgtgagggccgcccctcgacggaggccatcctggcctgccgcctcatg
gaccgtccgctgcgcccggccttcgtgaagggtctccgcaacgaggtccaggtggtcgtg
accatcctcgcgatcaaccccgacgtgcgctacgacgtcgtcgccatcaacgcggcgtcg
atgtccacgcagctctccggccttcccttctcgggtccgatcggtggcgtgcgtgtcgca
ctcgtctccgacggcagcggcaacgaccagtggatcgccttcccgaagcactccgagctc
gagaactcggtcttcgacatggtggtcgcgggtcgcatcgccggtgacgacgtcgcgatc
atgatggtcgaggcagaggcaaccgacaactcgtggaacctcatcaaggagaacggagcc
accgccccgaccgaggagatcgtcgccgacggcctcgaggcggccaagcccttcatccgc
gccctgtgcgaggcgcaggccgacctcgcgtcgcgcgccgcaaagcccaccgtcgagttc
cccgtgttcctggactaccaggacgacgtctactcggccatcgagtccgcaggctccgac
aagctcgcgcaggtcttccagatcgccgacaagcaggagcgcgagagcgcctccgacgcc
ctgaaggccgagctcctggacaccctgggcagccagttcgagggacgcgaaaaggaactg
tccgcagccttccgctcgctgaccaaggccgtcgtgcgccagcgcatcctcaaggaccag
gtccgcatcgacggccgtggcctcagcgacatccgcaagctgaccgccgaggtcgaggtg
ctgccgcgtgtccacggatcggcgatcttcgagcgcggcgagacccagatcatgggcgtc
accacgctgaacatgctcaagatggagcagcagatcgactcgctgtcgcccgtcacgcgc
aagcgctacatgcacaactacaacttcccgccctactccaccggtgagaccggccgcgtc
ggttcgccgaagcgccgcgagatcggtcacggagcactggcggagcgggccctcgtgccc
gtcctgccgacccgcgaggagttcccctacgcgatccgccaggtctccgaggcactgagc
tccaacggctcgacctcgatgggttcggtctgcgcctcgacgctctccctgctcaacgcg
ggtgtcccgctccgcgccccggtcgccggtatcgccatgggtctcgtctccgacgaggtc
gacggccagacccgctacgcggcgctgacggacatcctcggagccgaggatgcgttcggt
gacatggacttcaaggtcgccggtacctccgagttcgtcacggccatccagctggacacg
aagctcgacggcatcccggcgtcggtcctggccgcagccctgaagcaggcccgcgaggcc
cgcctgcacatcctgggcgtgctccaggccgcgatcgacaccccggacgagctctccgag
ttcgcgccgcggatcatctcggtcaagatccccgtggacaagatcggcgaggtcatcggc
cccaagggcaagatgatcaaccagatccaggaggacaccggagccgacatctcgatcgag
gacgacggaaccgtcctcatcggtgcgacgaacggtgagtcggccgaagccgcgcgtgcc
gcggtcaacgccatcgcgaacccgcaggtccccgagatcggcgagcgctacctggggacg
gtcgtcaagaccaccaccttcggcgccttcgtctcgctgaccccgggcaaggacggcctg
ctgcacatctccgagctgcgcaagctcgccggtggcaagcgcgtcgacaacgtcgacgag
gtcgtgtccgtgggccagaaggtccaggtcgagatcaccaaggtcgacgaccgcggaaag
ctgtccctctcgcccgtggtggcggacgaggccggcgactccgaggacgccggtatcgag
ctgcccgaggtcgcagaggccaactag
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