Arthrobacter agilis: NCTC2676_1_01279
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Entry
NCTC2676_1_01279 CDS
T07056
Symbol
ypfD
Name
(GenBank) 30S ribosomal protein S1 homolog
KO
K02945
small subunit ribosomal protein S1
Organism
aagi
Arthrobacter agilis
Pathway
aagi03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
NCTC2676_1_01279 (ypfD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
aagi03011
]
NCTC2676_1_01279 (ypfD)
Ribosome [BR:
aagi03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
NCTC2676_1_01279 (ypfD)
Bacteria
NCTC2676_1_01279 (ypfD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
S1
S1_RRP5
Spt6_S1
S1_2
RNase_II_C_S1
SOGA1-2-like_CC
Motif
Other DBs
NCBI-ProteinID:
VDR31994
LinkDB
All DBs
Position
1:1400065..1401537
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AA seq
490 aa
AA seq
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MTITTTEKQGAPQVAINDIGTAEDFLAAIDATIKYFNDGDLVEGTVVKVDRDEVLLDIGY
KTEGVIPSRELSIKHDVDPGDVVSVGDQVEALVLTKEDKEGRLILSKKRAQYERAWGDIE
KVKEEDGVVTGTVIEVVKGGLILDIGLRGFLPASLVEMRRVRDLAPYIGQQIEAKIIELD
KNRNNVVLSRRAWLEQTQSEVRSTFLNKLEKGQVRPGVVSSIVNFGAFVDLGGVDGLVHV
SELSWKHIDHPSEVVEVGQEVTVEVLEVDLDRERVSLSLKATQEDPWQTFARTHALGQVV
PGKVTKLVPFGAFVRVEDGIEGLVHISELAVRHVELAEQVVSVGDELFVKVIDIDLERRR
ISLSLKQANEGVDADSTEFDPALYGMAAEYDEEGNYKYPEGFDPESNEWLEGYETQRAAW
EAQYAEAQSRWESHKKQVVQHASDDAAAASEPAESTSTSYSSDPVVTDSGSGTLASDEAL
AALREKLTGA
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaccatcaccaccaccgagaagcaaggtgccccgcaggtcgcgatcaacgacatcggc
accgctgaggacttcctcgcagctatcgacgcgaccatcaagtacttcaacgacggcgat
ctcgtcgagggtaccgtcgtcaaggtcgatcgcgacgaggtcctgctcgacatcggttac
aagaccgagggtgtcattccttcccgcgagctttccatcaagcacgacgtcgatcccggg
gacgtcgtctccgtgggcgatcaggtcgaggccctggtgctcaccaaggaagacaaagaa
ggccgactgatcctctccaagaagcgggctcagtacgagcgcgcctggggtgacatcgag
aaggtcaaggaagaggacggcgtcgtcaccggcaccgtcatcgaggtggtcaagggtggt
ctcatcctcgacatcggcctgcgcggcttcctgcccgcgtccctcgtcgagatgcgtcgc
gtccgcgacctggcaccgtacatcggccagcagatcgaagcgaagatcatcgagctcgac
aagaaccgcaacaacgtcgtgctgtcgcgtcgtgcgtggctcgagcagacccagtccgag
gtgcgctcgacgttcctcaacaagctggagaagggccaggtccgcccgggcgtcgtctcc
tcgatcgtcaacttcggtgcattcgtggacctcggtggcgtcgacggtctcgtccacgtc
tccgagctgtcctggaagcacatcgaccacccgtccgaggttgtcgaggtcggccaggaa
gtcaccgtcgaggttctcgaggtcgacctggaccgcgagcgtgtctcgctctccctcaag
gccacgcaggaagatccctggcagaccttcgcccgcacgcacgcgctgggccaggttgtc
ccgggtaaggtcaccaagctggttccgttcggcgcgttcgttcgcgtcgaggacggcatc
gagggcctggtccacatctcggagctggcagtccgccacgtcgaactcgcagagcaggtc
gtctcggtcggcgacgagctcttcgtcaaggtcatcgacatcgacctcgagcgccgccgg
atctccctcagcctcaagcaggccaacgagggcgtcgacgcggacagcaccgagttcgat
cccgcgctctacggcatggccgccgagtacgacgaagagggcaactacaagtaccccgag
ggcttcgaccccgagtcgaacgaatggctcgagggctacgagacgcagcgtgctgcctgg
gaagcccagtacgccgaggcacagtcccgctgggaatcgcacaagaagcaggtcgtgcag
cacgcgtccgacgacgccgctgccgcgagcgagccggccgagtccacctcgaccagctac
tcgtccgaccccgtggtcacggactccggttcgggaaccctcgcgtccgacgaggcactc
gcagcactccgcgagaagctgaccggggcgtaa
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