Arthrobacter agilis: NCTC2676_1_01981
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Entry
NCTC2676_1_01981 CDS
T07056
Symbol
rafA
Name
(GenBank) Alpha-galactosidase
KO
K07407
alpha-galactosidase [EC:
3.2.1.22
]
Organism
aagi
Arthrobacter agilis
Pathway
aagi00052
Galactose metabolism
aagi00561
Glycerolipid metabolism
aagi00600
Sphingolipid metabolism
aagi01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
NCTC2676_1_01981 (rafA)
09103 Lipid metabolism
00561 Glycerolipid metabolism
NCTC2676_1_01981 (rafA)
00600 Sphingolipid metabolism
NCTC2676_1_01981 (rafA)
Enzymes [BR:
aagi01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.22 alpha-galactosidase
NCTC2676_1_01981 (rafA)
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Gene cluster
GFIT
Motif
Pfam:
Melibiase
Glyco_hydro_36N
Glyco_hydro_36C
GHL10
YqzH
Motif
Other DBs
NCBI-ProteinID:
VDR32678
LinkDB
All DBs
Position
1:complement(2135433..2137589)
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AA seq
718 aa
AA seq
DB search
MTFEPLHLSRGGTSVLLEPHAHGLPVFTYWGPALGPLSAPDVAALVTAQQPQRVSGGIDV
PARLNLLPLESTGWQGTPGLTGDRGGSYLYPRFVVTSALVEDDGATAVIEADDDVAHLRL
RVRIGIDGSGLVTQQLAVTNTGSDEYEVRSLTACFPLLPSAAEVLDFTGRHLRERTPQRH
ALTTGTYSRASRRGRPGADATVLLAAGVEGFGFVHGLVQGIHLAWSGNQQVLAERTPAGG
SFLAAGEVLAAREVLLAPGESYSTPAVIGSWGHGLNDLSGRFHRHLRSRSSHPRRPRPVT
LNTWEAVYFDLDLPRLRALADRAASLGVERFVLDDGWFRGRRDDTSSLGDWYVDESVWPG
GLSPIIDHVRALGMEFGLWFEPEMVNTDSELARAHPDWILKPEGRLPLPGRQQQVLNLAH
PAAYAYILERLDDLLSSNDIAYVKWDHNRDLLEAADARTGRAAVHRHVEALYRLLDELRR
RHPHLEIESCASGGARVDLGILARTDRIWTSDCIDPIERLVNQKYTGLVVPPELMGMHIG
GPVSHSTGRAHTLPFRAATAVFGHYGIEWDISDLSETEYEVLARYVGLHRSWREDLHRGT
VVHADLTDPAMDLRGVVAEDGTRALFGYSLTASSASYPPGSLTFPGLEADSVYEVRPAVP
EEGHPGNGQSALAWLQAALDGAPVRLSGRVLAEVGLQAPVLLPEQTLLIELTRLPAMP
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgaccttcgaaccgctccacctctcccgtgggggtaccagcgtcctgctcgaaccccac
gcgcacggcctgcccgtcttcacctactggggaccggcgctggggccgctgtcggcaccg
gacgtcgcagccctcgtcactgcgcaacagccccagcgggtatccggtggcatcgacgtg
ccggctcggttgaatctcctcccgctcgagtccacgggctggcaggggacgccgggcctg
acgggagatcgcggggggtcgtatctctacccccggttcgtagtgacgtcggcgctcgtg
gaggacgacggcgccaccgcggtgatcgaggcggacgacgacgtcgcgcacctccgcctc
cgggtgcggatcggtatcgacgggtcgggtctcgtgacgcagcagctcgccgtgacgaac
acgggttccgacgagtacgaggtccgatccctcacggcctgcttccccctgctcccgtcc
gcggcggaggtcctcgacttcacgggccgccatctccgcgagcgcaccccgcagcggcat
gcgctgacgaccggcacctattcgcgggcgagccgccggggacggcccggagcggatgcg
acggtgctgctcgcagcaggagtcgagggcttcggattcgtccatgggctggtacagggt
atccacctcgcctggagcggcaaccagcaggtcctcgccgagcggactccggcgggcggt
tccttcctcgcggccggcgaggtcctcgcggcgcgcgaggtgctgctcgcaccgggggag
agctattccacacccgcggtgatcgggtcgtggggtcacggcctgaacgacctgtccggg
cgcttccaccggcacctgcgctcgcggtcgtcccacccgcgccgcccgcggcccgtcacg
ctcaacacgtgggaggccgtgtacttcgatctcgacctcccgcgcctccgggcgctcgcc
gaccgcgcggcgtccctgggggtggagcgcttcgtgctcgacgacggctggttccgcggg
cggcgcgacgacacctcctcgctgggcgactggtacgtcgacgagtcggtgtggcccggg
ggactctcgcccatcatcgatcacgtccgggcgctcggcatggagttcgggctctggttc
gaacccgagatggtcaataccgactccgagctggcccgcgcccaccccgactggatcctg
aagccggagggccgtctgccgttgccgggacggcagcagcaggtcctgaatctggcgcat
cctgccgcctacgcgtacatcctcgagcggctcgacgacctgctgtcctccaacgacatc
gcctacgtcaagtgggaccacaatcgggacctgctcgaagccgccgacgcgcgtacgggc
cgggcggcggtccaccggcacgtcgaggcgctgtaccggctgctcgacgagctgcggcgc
cggcacccgcacctcgagatcgagagctgcgcctcgggtggggcacgcgtggatctgggc
atcctggcgcgcaccgaccggatctggacgagtgactgcatcgacccgatcgagcgcctc
gtcaaccagaagtacaccggtctcgtggtcccgccggagctcatggggatgcacatcggc
gggcccgtctcccactccacgggccgggcacacacccttccgttccgcgccgcgaccgct
gtcttcggccactacgggatcgagtgggacatctcggacctgtccgagaccgagtacgag
gtcctcgcgcggtatgtcgggctccaccgctcctggcgtgaggatctccaccgcggcacg
gtcgtgcacgccgatctgacggaccccgccatggacctgcggggagtcgttgccgaggac
ggcacgcgtgcgctgttcggctactcgctcactgcctcgagtgcgagctatccgccgggt
tccctcacgttcccggggctggaggccgactcggtgtacgaggtgcggccggccgtcccg
gaggagggccaccccgggaacggacaatccgccctcgcctggctgcaggcggcgctggac
ggcgcaccggtccgtctcagcgggcgggtcctcgcggaggtcgggctccaggccccggtg
ctcctgcccgagcagacgctgctgatcgagctgaccaggctgcccgccatgccctga
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