Arthrobacter agilis: NCTC2676_1_02556
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Entry
NCTC2676_1_02556 CDS
T07056
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aagi
Arthrobacter agilis
Brite
KEGG Orthology (KO) [BR:
aagi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aagi03032
]
NCTC2676_1_02556 (topA)
03400 DNA repair and recombination proteins [BR:
aagi03400
]
NCTC2676_1_02556 (topA)
Enzymes [BR:
aagi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
NCTC2676_1_02556 (topA)
DNA replication proteins [BR:
aagi03032
]
Prokaryotic type
DNA Topoisomerases
NCTC2676_1_02556 (topA)
DNA repair and recombination proteins [BR:
aagi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
NCTC2676_1_02556 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
VDR33246
LinkDB
All DBs
Position
1:complement(2751991..2754738)
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AA seq
915 aa
AA seq
DB search
MPTKATDKKHGKKLVIVESPSKIKSISGYLGEGFQVAASMGHIRDLPQPSDLPAELKKSS
VGKFAVDLDKDFEPYYVVSPEKRKTVAELKAALKDADELYLATDADREGEAIAWHLLQVL
KPKVPVYRLTFGEITKEAVTRALGELREVDIPMVDAQETRRILDRLYGYEISPVLWRKVA
RGLSAGRVQSVATRLVVERERERMAFRSASYWDLTGTFTPEDSAKGSTFPAKLVAVDGSR
IASGKDFSDRGELKASNAVRLDEDAARSLASGLETAEFAVRSLETKPYTRRPAAPFTTST
LQQEAARKLRFSSKVTMQVAQRLYENGYITYMRTDSSALSDQAINAARRQASELYGPEYV
PEARRVYKGKAKNAQEAHEAIRPAGDSFRTPAQVAQSLRGDEFRLYELIWKRTVASQMAD
AKGSTASLRLGARSTDGRDAEFAASGTVITFRGFMAAYEEGRDADRAEDGADDDTQGTRL
PNVAKGDALGAKAIEAVGHETSPPPRYTEASLVKVLDERGIGRPSTYAATMSTIMDRGYV
RTRGQALVPSWIAFSVVRLLEEHFNDYVDYDFTAELEEDLDRISRGEAGRVEWLTSFYYG
DRKETGLHTIVNDLGEIDARRINSVEIAEGITLRVGKFGPYLEKPLPADAPEGTEPQRAN
VPEDLAPDELTAEKAVELMEAPTSQERVLGTDPETGRSIVARDGRYGPYVIELIPEVTAE
ELASQPVEYYKNGKPKPPKKPVKVKPRTGSLFTSMSVDTVTLEEALKLMNLPRVLGTDEE
GKEITVQNGRFGPYLKKGSDSRSIGSEEEIFTITREQALEIYAQPKQRGGRTVTPPLAEF
GDDPVSEKPIVVKDGRFGPYITDGITNITVPGSMAIEELTREQAIDMLAEKRAKGPAPKK
TTRRAPAKRKTAAGK
NT seq
2748 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaccaaggccacggacaagaagcacggcaagaagctcgtcatcgtcgagtccccc
agcaagatcaagagcatctcggggtatctcggtgagggtttccaggtcgcggcgtccatg
gggcacatccgtgatctcccccagccgtcggacctccccgcggagctcaagaaatcctcc
gtgggcaagttcgccgtggacctcgacaaggatttcgaaccgtactacgtcgtgtccccc
gagaagcggaagaccgtcgcggagctgaaggcggccctgaaggacgccgacgagctctac
ctcgcgaccgacgccgaccgcgagggcgaagccatcgcgtggcacctcctgcaggtcctg
aagccgaaggtcccggtctaccgactcacgttcggtgagatcacgaaggaagccgtgacg
cgggccctcggcgaactgcgcgaggtcgacatccccatggtcgacgcgcaggagacccgg
cgcatcctggaccgcctctacggctacgagatctcgcccgtcctctggcgcaaggtggcg
cgcggcctgtccgcaggccgcgtccagtccgtcgcgacgcgcctcgtggtcgagcgcgag
cgggagcgcatggcgttccggtccgcgtcctactgggacctgaccggcacgttcacgccg
gaggattccgcgaagggcagcaccttccccgcgaagctggtggccgtcgacggcagccgg
atcgcctccggcaaggacttctccgaccgtggcgaactgaaggcctcgaatgccgtccgg
ctcgacgaggacgccgcgcggtccctcgcctcgggcctggagacggccgagttcgcggtg
cggtccctcgagaccaagccctacacgcgccgtcccgccgcgccgttcacgacgtcgact
cttcagcaggaggcggcccgcaagctgcgcttcagctcgaaggtcaccatgcaggtggcg
cagcggctgtacgagaacggctacatcacctatatgcgtaccgactcgtcggcgctgtcc
gaccaggccatcaatgccgcccgccggcaggcgtcggagctgtacggacccgagtacgtg
cccgaggcgcgtcgggtctacaagggcaaggccaagaacgcgcaggaggcgcacgaggcc
atccggcccgccggtgactccttccgcacccccgcccaggtggcgcagtccctgcgcggt
gacgagttccgcctctacgagctcatctggaagcgcaccgtcgcctcgcagatggccgat
gccaagggctcgacggcgtcgctgcgactcggtgcgaggagcaccgacgggcgggacgcc
gagttcgcggcctccggcacggtcatcaccttccgcgggttcatggccgcctacgaggag
gggcgcgatgccgaccgcgcggaggacggcgccgacgacgacacgcagggcacgcgcctg
ccgaacgtagccaagggtgacgcgctcggagcgaaggccatcgaggctgtcggccacgag
acctccccgcccccgcgctacaccgaggcctccctcgtgaaggtcctcgacgagcgcggc
atcggccgtccgtccacctacgcggcgactatgtccaccatcatggaccgggggtacgtg
cggacgcgcggccaggcactggtgccgagctggatcgcgttctcggtggtgcggctgctc
gaggagcacttcaacgactacgtggactacgacttcacggcggaactcgaggaggatctc
gaccgcatctcccgcggggaggcggggcgggtcgagtggctcaccagcttctactacggt
gaccgcaaggagaccgggctccacaccatcgtcaacgatctcggtgagatcgacgcccgc
cggatcaactcggtggagatcgccgaaggcatcacgctgcgcgtcggcaagttcggcccc
tacctggagaagccgctgcccgctgacgcacccgagggcacggagccccagcgcgcgaat
gtccccgaggacctcgccccggacgagctgacggctgagaaggcggtcgagctcatggag
gctccgacgtcgcaggagcgcgtgctcggcaccgatccggagaccggacgctcgatcgtg
gcccgcgacggccggtacggcccctacgtgatcgagctgatccccgaggtcacggccgag
gaactcgcgagccagccggtggagtactacaagaacggcaagcccaagccgccgaagaag
cccgtgaaggtcaagccgcgcaccggatcgctcttcacgtccatgtcggtggacaccgtg
acgctcgaggaggccctcaagctcatgaacctcccgcgcgtgctcggcacggacgaggag
ggcaaggagatcacggtgcagaacggacgcttcggcccgtacctcaagaagggcagcgac
tcccggtccatcgggtccgaggaggagatcttcaccatcacccgtgagcaggccctggag
atctacgcgcagcccaagcagcgtggcggccggacggtgaccccgccgctggcggagttc
ggcgacgatcccgtgagcgagaagccgatcgtggtgaaggacggccgcttcggcccgtac
atcacggacggcatcacgaacatcacggtcccgggttccatggccatcgaggagctcacg
cgtgagcaggccatcgacatgctcgcggagaagcgggcgaagggcccggctccgaagaag
accacgcggcgggctccggcgaaacgcaagacggcggcgggcaaatag
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