Aggregatibacter actinomycetemcomitans HK1651: CF65_00506
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Entry
CF65_00506 CDS
T03184
Name
(GenBank) ATP-dependent RNA helicase, putative
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
aah03009
]
CF65_00506
Enzymes [BR:
aah01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
CF65_00506
Ribosome biogenesis [BR:
aah03009
]
Prokaryotic type
rRNA helicases
CF65_00506
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
UvrA_inter
AAA_19
Cas3-like_C_2
WSD
Motif
Other DBs
NCBI-ProteinID:
AHN71075
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All DBs
Position
complement(351818..353149)
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AA seq
443 aa
AA seq
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MTNLIQFADFDLAPELLNALQKKGYQRPTAIQQETIPAAMEGGDVLGSAPTGTGKTAAFL
LPAIQHLLDYPRRKPGAPRVLVLTPTRELAMQVAEQAKELACFTKLSIATITGGVAYQNH
GEIFNKNQDIVVATPGRLLQYIKEENFDCRTVEILIFDEADRMLQMGFGQDAEKIAAETR
WRKQTLLFSATLEGDLLEDFAARTLNEPVKIEAEPSRRERKKIQQWYYHADSHEHKFKLL
ARFIEQEQVSKGIVFVRRREEVRELAENLRKRGIRSAYLEGEMAQTQRNNAIDKLKNGVV
KVLVSTDVSARGIDIDDVSHIMNFDLPYSADTYLHRIGRTARAGKKGTAVSFVEAHDYRL
LGKIKRYTGEILKARVIEGLEPRTKAPKDGEIKTVSKKQKAKKLEKREARKKADKKVKQR
HQDRKNIGKRRKPSASTTAAAVK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atgacaaacctcatccaatttgcagattttgatctcgcgcccgaattactcaacgccctt
cagaaaaaaggttatcagcgccccaccgcgatccagcaggaaaccattccggcggcgatg
gaaggcggtgacgtattgggttccgcgcccaccggcaccggtaaaacggcggcgtttctg
ttgccggcgattcagcatttgctggattacccacgtcgtaaaccgggtgcgccgcgcgtg
ttggtgttaacgccgacccgtgaacttgccatgcaggtagcggaacaggcgaaggagctt
gcctgcttcaccaaactcagtatcgcgactattacgggcggtgtggcgtatcaaaatcac
ggggaaattttcaataaaaatcaagatattgtagttgccacgccgggacggttgttgcaa
tacattaaagaagaaaattttgattgccgcacggtggagattcttattttcgatgaagcg
gacagaatgttgcaaatggggttcgggcaggatgcggaaaaaattgcggcggaaacccgc
tggcgcaagcaaaccttgttgttctccgcaactcttgaaggcgatttgctggaggatttt
gccgcacgtactttaaacgaaccggtgaaaattgaggcggaaccgagccgccgtgaacgc
aagaaaattcagcaatggtattaccacgccgacagccatgagcataaattcaaattgctg
gcacgcttcattgaacaggagcaggtgagcaaaggcattgtgttcgtgcgtcgccgcgaa
gaagtgcgcgaactggcggaaaatttgcgtaagcgtggtattcgcagcgcctatctggaa
ggcgaaatggcacaaacccagcgcaataatgccatcgacaagctgaaaaacggcgtggta
aaagtgctggtttccacggatgtctccgcacgtggcattgatattgatgatgtcagccac
attatgaatttcgatttaccatacagcgccgacacgtatttgcaccgcatcgggcgcacc
gcacgcgccggcaaaaaaggcaccgcggtgtcttttgtggaagctcacgattaccgcctg
ctcggcaaaatcaaacgttataccggcgaaatcttaaaagcacgcgtcattgagggcttg
gaaccacgcaccaaagcaccgaaagacggcgaaatcaaaaccgtcagcaagaaacaaaaa
gcgaagaaactcgaaaaacgtgaagcgcggaaaaaagcggataagaaagtcaaacagcgc
catcaagatcgtaaaaacattggtaagcgccgcaaaccgagcgcttcaaccacggcagca
gccgttaaataa
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