Aggregatibacter actinomycetemcomitans HK1651: CF65_01242
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Entry
CF65_01242 CDS
T03184
Name
(GenBank) not yet annotated
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CF65_01242
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aah03021
]
CF65_01242
03400 DNA repair and recombination proteins [BR:
aah03400
]
CF65_01242
Enzymes [BR:
aah01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CF65_01242
Transcription machinery [BR:
aah03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CF65_01242
DNA repair and recombination proteins [BR:
aah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CF65_01242
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
HHH_XRCC3_RpoA
Motif
Other DBs
NCBI-ProteinID:
AHN71650
LinkDB
All DBs
Position
846083..847072
Genome browser
AA seq
329 aa
AA seq
DB search
MQGAVTEFLKPRLVDIEQISSTQAKVILEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSSKEGVQEDILEVLLNLKGLAVKVQNKDDVLLTLSKSGIGPVVAADITHDGD
VEVINPEHVICHLTDENASISMRIRVRRGRGYVPASVRAQIQDEERPIGRLLVDACYSPI
ERIAYNVEAARVEQRTDLDKLVIELETNGTIDPEEAIRRAATILAEQLDAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAETIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIAED
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgcagggtgctgttacagaatttttaaagccgcgcttagttgatattgaacaaattagc
tccactcaagctaaggttatcttggagccattagagcgtggtttcggtcatactctagga
aatgcattgcgtcgaattcttttatcttcaatgccaggttgtgctgttactgaagtagag
attgatggtgtattgcatgaatatagtagtaaagagggtgtacaagaagatattctggaa
gtacttttaaatctaaaaggtttagctgtaaaagtacagaataaggatgatgttcttctt
acacttagcaagtctggaattggccctgttgttgctgcagatattacccatgatggtgat
gttgaagttattaatccggagcatgtaatctgtcatctaaccgatgaaaacgcctctatt
agtatgcgaattcgtgttcggcgtggtagaggatatgtgccggcatcagttcgtgctcaa
attcaggatgaagagcgccctattggtcgtttattagtagatgcctgttatagcccgatt
gagcgtattgcttacaatgttgaagcggcacgtgttgaacaacgtaccgatttagacaaa
ttggttattgagctggagacaaatggtactattgatccggaagaagctattcgtcgggca
gcaacaattttagcagagcaactcgatgcattcgttgatttacgtgatgttcgtcaacct
gaagttaaggaggagaagccggaatttgatccaatccttcttcgccctgtagatgattta
gagttgacagttcgttctgctaactgtttgaaagcagaaacaattcactatatcggtgat
ttagttcaacgtacagaagttgagttacttaaaactcctaatttaggtaagaaatcgctt
actgagattaaggatgtactcgcttcaagaggcttatcactaggtatgcgccttgagaat
tggccaccagcaagtattgctgaagactag
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