Aggregatibacter actinomycetemcomitans HK1651: CF65_01325
Help
Entry
CF65_01325 CDS
T03184
Name
(GenBank) formamidopyrimidine-DNA glycosylase, putative
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CF65_01325
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aah03400
]
CF65_01325
Enzymes [BR:
aah01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
CF65_01325
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
CF65_01325
DNA repair and recombination proteins [BR:
aah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
CF65_01325
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
H2TH
Fapy_DNA_glyco
zf-FPG_IleRS
Zn_ribbon_IS1595
NFACT_N
Zn_ribbon_6
Zn_ribbon_8
Zn_ribbon_TiaS
DZR
Zn_ribbon_3
Motif
Other DBs
NCBI-ProteinID:
AHN71714
LinkDB
All DBs
Position
894887..895702
Genome browser
AA seq
271 aa
AA seq
DB search
MPELPEVETAVRGVSPYLKDYVIEKIVVRQPKLRWAVSPELAELHHVKILDLTRRAKYLV
IHTEQGYIIGHLGMSGTVRIVFHGSPIDKHDHLDIVVNNGKLLRYNDPRRFGAWLWTEKL
DEFHLFLKLGPEPLSEEFNAEYLFKKLHKKTTALKTVLMDNTVVVGIGNIYANESLFLCG
LHPLKLAANLTRKQCERLVDTIKSVLAKAIEQGGTTLKDFLQPDGRPGYFAQELLVYGNK
GKPCPKCGTKIESLVIGQRNSFYCPTCQKKG
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcctgaagtggaaaccgccgtacgcggtgtgagtccttatctgaaagat
tatgttattgaaaaaatcgtagtccgccagccgaaactgcgctgggctgtatcgcctgaa
ttggcagagttgcatcatgtaaaaattttggatttaacccgtcgcgccaaatatctggtt
attcacaccgaacagggttacatcatcggacatttggggatgtcgggaacggtgcgtatt
gtgtttcatggcagcccgattgataaacacgatcatcttgatattgtggtgaataacggc
aaattactgcgttataacgatccccgccgtttcggtgcctggctctggacggaaaaattg
gatgaattccatttattcttaaaactgggacctgagccgctatcagaggaattcaatgca
gagtacttgtttaaaaaattacacaaaaaaacaaccgcacttaaaaccgtattaatggat
aacaccgtggtggttggtattggcaacatttatgccaatgaaagtctatttctgtgcggg
ttacatcctttgaagctcgccgctaatctaactcgaaaacaatgcgaacgcttggtggat
accattaaatcggtgcttgccaaagccattgaacaaggcggcaccacgctaaaagatttt
ctccagcccgacggcagaccggggtattttgcacaagaattgctggtttacggcaacaaa
ggcaaaccatgtccgaagtgcggtacaaaaatcgagagtttagtcatcgggcaacggaat
agtttttattgcccgacgtgccagaagaagggataa
DBGET
integrated database retrieval system
