Aggregatibacter actinomycetemcomitans HK1651: CF65_01737
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Entry
CF65_01737 CDS
T03184
Name
(GenBank) exoribonuclease II, putative
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aah03016
]
CF65_01737
Enzymes [BR:
aah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
CF65_01737
Transfer RNA biogenesis [BR:
aah03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
CF65_01737
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
DUF2274
Motif
Other DBs
NCBI-ProteinID:
AHN72018
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All DBs
Position
complement(1172784..1174763)
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AA seq
659 aa
AA seq
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MFQDNPLLAQLKQQIHDSKERVEGTVKSTDKAYGFLECDKKSYFIAPPAMKKVMHGDKIS
ATIEKQGDKEQAEPEALIEPILTRFIAKVRFNKDKKLQVLVDHPNINQPIGAAQNKSVKK
ELQEGDWVVASLKTHPLRDDRFFYAQITQFICHADDELAPWWVTLARHEQPREPVQGQDQ
YEMQDKETRENLTALHFVTIDSETTQDMDDALYIEPLTSNNEQTGWQLLVAIADPTAYIS
LDSQIEKDAKQRCFTNYLPGFNIPMLPRELSDELCSLKPNETRPALVCYIQTDLQGNIIA
PAKFVLANVQSKAKLTYSRVSDYLEGKENAWQPENQDMAQQIHWLHQFSLARTQWRKTHA
LLFKEKPDYSFVLGENGKVQEIKAEYRRIANQIVEESMIIANICAAQFLQKNLQCGIFNT
HSGFDKKFLENAHHFLLASLANEENKAELQARYTVEHLATLNGYCQMRHDIEPIEGDYLE
FRLRRFLTFAEFKAELAPHFGLGLNGYATWTSPIRKYSDMVNHRLIKAYLAHRPYEKPEE
SVLVRLQEARRQNRLVERDIADWLYCRYLADKVAEKVEFEAEVQDITRGGLRVLLLANGA
SIFIPASTLHDNKEEIVINTDEIAFYVKDQRLYKIGDILRVQLTEVKEATRSIMGMVIK
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataatcccctactcgcccaattaaaacaacaaattcacgacagcaaagaa
cgtgtggaaggcacggtaaaaagcactgataaagcttacggttttttagaatgtgacaaa
aaaagctattttattgcaccgccggcaatgaaaaaagtgatgcacggcgacaaaatcagc
gccactattgaaaaacagggcgacaaagaacaagcggaaccggaagccctgatcgaaccg
atactcacccgttttatcgccaaagtgcggttcaataaagacaagaaattacaggtattg
gtcgatcacccgaatatcaatcaacccattggcgccgcgcaaaacaaatccgtaaaaaaa
gagttacaggaaggcgattgggtggtggcatcacttaaaactcatccgctgcgtgatgat
cgttttttctatgcgcaaattacccaattcatttgccacgccgatgatgaattggcgcct
tggtgggtcacccttgcccgtcacgagcaaccacgtgagcctgttcaggggcaagatcaa
tatgaaatgcaggataaagaaacgcgcgaaaatctgaccgcacttcacttcgtcaccatc
gactcggaaaccacgcaggacatggatgacgccttatatattgagccgttaacctcaaat
aatgagcaaaccggctggcaattgcttgtggcgattgccgatccgacggcttatatcagc
ttggattcgcaaatcgagaaagatgctaagcaacgctgtttcaccaattatctgccgggc
ttcaacatcccaatgttaccacgcgaactctccgacgagctttgttccttaaaacctaac
gaaacccgtcccgcactggtttgttatattcaaacggatttacagggcaatatcatcgcg
ccggcaaaatttgtgttagcgaatgtacaatcgaaagctaaattgacttatagtcgggtg
tccgattatttagaaggcaaagaaaatgcctggcagccggaaaaccaagacatggcacag
caaattcattggctgcatcaatttagccttgccagaacacaatggcgcaaaacccatgcc
ctattgtttaaagaaaaaccggattattctttcgtgttgggagaaaacggcaaggtgcag
gaaattaaggcggaatatcgccgtattgccaaccaaatcgtggaagaatccatgattatc
gccaatatctgcgccgctcaatttttacagaaaaacctgcaatgcggtattttcaatacg
cacagcggattcgacaaaaaattcctggaaaacgcccatcattttctgttagccagttta
gcaaacgaagaaaacaaagcggaactacaagcccgctataccgtagagcatttagcgacg
ctaaacggctactgccaaatgcgtcacgatattgaaccgattgaaggggattatttggaa
ttccgcctgcgtcgattcttaacttttgcagaatttaaagcggaattggcaccgcacttt
gggctgggattgaacggttacgctacttggacgtcaccgattcggaaatattccgacatg
gtgaatcatcgcctgattaaagcttatttagcccatcgcccttatgaaaaaccggaagaa
agcgtgctggtgcgcttgcaagaagcccgccgccaaaatcgcctggtggaacgtgacatt
gccgattggctatattgtcgctatcttgccgataaagttgccgaaaaagtggaatttgaa
gcagaagtacaagatattacccgtggaggtttacgtgttttattgttggcaaacggcgcg
tccatatttattcctgcctcaaccttgcacgacaacaaagaggaaattgttatcaatacc
gacgaaatcgccttctatgtcaaagatcagcgtctttacaagatcggagatattttacgc
gtgcaactcacggaagtgaaggaagcaacacgtagtattatggggatggtcatcaagtaa
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