Aggregatibacter actinomycetemcomitans HK1651: CF65_01747
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Entry
CF65_01747 CDS
T03184
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ,putative'
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03410
Base excision repair
aah03430
Mismatch repair
aah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
CF65_01747
03430 Mismatch repair
CF65_01747
03440 Homologous recombination
CF65_01747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aah03400
]
CF65_01747
DNA repair and recombination proteins [BR:
aah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
CF65_01747
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CF65_01747
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
CF65_01747
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHHA1
DHH
RecJ_OB
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
AHN72027
UniProt:
X2JV89
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All DBs
Position
1181499..1183193
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AA seq
564 aa
AA seq
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MPAGNKLCDDPLLDRLYRSRHIKNACQLDRTLAAIHNPNLMSGLDDAVALLLEAYEKQQK
IVIVGDFDADGATSTALAVLALRQLGFVNVAYLVPNRFEQGYGLSVAVAQEALALDVELL
ITVDNGVSSHEGVAFLKERGVNVIVTDHHLPPESLPSADAIINPNLAHCGFPSKNLAGVG
VAFYLMLALRAKFRELGMFDAKNQPNFTELLDLVALGTVSDVVPLDQNNRILVYQGLARI
KAQRCRFGIRALAEVAKRDLAGFSASDLGFSIAPRLNAAGRLDNMSVGVELLLAEDMESA
RALALELDGLNQARKEIEQGMKLEALKICQNLTALENQLPHSIVLYQADWHQGVLGIVAS
RIKDQFHRPVIAFAQEQDGILKGSARSIPGLHIRDALERVYSQHPDLILKFGGHAMAAGL
SINENYFADFQRIFNETVSELLAQEQLQGSIWTDGELSVNELNLNTAERLKSAGPWGQAF
PEPLFDGEFKILQQRLVGEKHLKMMVESKLGGPLMDAIAFNVDTRYYPDLSIKTAKLVYK
LDINEFRGNRDIQLLIDYIEPLEN
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtgccggcaggtaataaactctgtgacgatccgctcttggatcgtctctatcgctcgcgg
cacattaaaaacgcttgccagttagaccgcactttagccgccattcacaacccgaatctg
atgtccggtttggatgatgctgtagcgcttttgctggaagcctacgaaaaacagcaaaaa
atcgttatcgtcggcgatttcgatgcggacggtgcgacaagcacggcattggcggtgttg
gcgttgcgccagcttggttttgtcaacgtcgcttatttggtaccgaatcgcttcgagcaa
ggttacggtttaagtgttgcagtggcgcaagaggcattggcgctggatgttgaactgctt
atcacggtggataatggtgtgtcttctcatgagggcgtagcgtttctaaaagaacggggc
gtgaatgttatcgtcaccgaccatcatttgccgccggaaagcttgccgagtgccgatgcc
atcatcaatccgaatcttgcccattgcggttttccgtcgaaaaatcttgccggtgtgggc
gtggcgttttatcttatgcttgctttgcgggcgaaatttcgtgaattgggcatgtttgac
gccaaaaatcagccgaatttcaccgaactgctggatttggtggcgttaggtacggtgtct
gatgtagtgccgttggatcaaaacaatcgcattctggtgtatcagggcttggcgcgtatt
aaagcgcagcgttgccgttttggtattcgagctttggcagaagtggcaaaacgggattta
gcgggattttccgcatcggatttgggtttttctattgcaccgcgattaaatgcggcggga
cgtttggataatatgtccgtaggcgttgaattattgctagcagaagacatggaaagcgcc
cgtgccttggcgttagaattagacggcttaaatcaagcgcgcaaagaaatcgagcagggc
atgaagctggaagctttaaaaatatgccaaaatctcaccgcacttgaaaaccaattgcca
cattccatcgtgctgtatcaggcggattggcatcaaggtgtactgggcattgtggcatcg
cgtattaaagaccaatttcaccgcccggtgattgcctttgcacaggagcaagatggcatt
ttaaaaggttccgcacgctccattccgggtttacatattcgtgatgcgctggaacgggtt
tattcgcagcacccggatttaattttaaaattcggcggtcatgcaatggcggcgggctta
agcattaatgaaaactattttgccgattttcaacgcatttttaacgagacggtcagtgag
ttgttggctcaggaacaattacaaggcagcatttggacggatggcgaactgagcgtgaat
gagctgaatctgaatacggcggaacgtttaaaatctgccggcccttgggggcaagccttc
cccgaacctttatttgacggcgagtttaaaatcctacaacagcgcttggtaggggaaaaa
catttaaaaatgatggtggaatccaaactgggcggaccattgatggatgctatcgcattt
aatgtggatacgcgctattatcctgatttatcaataaaaacagcaaaactggtatataag
ttagacattaatgaatttcgcggcaatcgggatattcagttattaattgattatattgaa
cctttagagaattag
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