Aggregatibacter actinomycetemcomitans HK1651: CF65_02265
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Entry
CF65_02265 CDS
T03184
Name
(GenBank) exodeoxyribonuclease V, alpha subunit, putative
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CF65_02265
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aah03400
]
CF65_02265
Enzymes [BR:
aah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
CF65_02265
DNA repair and recombination proteins [BR:
aah03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
CF65_02265
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
RecD_N
AAA_11
NAT10_TcmA_helicase
UvrD_C_2
Viral_helicase1
AAA_22
SH3_13
UvrD-helicase
SLFN-g3_helicase
nSTAND3
DEAD
NTPase_1
AAA_16
ResIII
UvrD_C
AAA_7
TrwB_AAD_bind
NACHT
T2SSE
CbiA
PhoH
AAA_28
ATPase
AAA
MeaB
SRP54
AAA_29
DUF7953
AAA_24
DUF7226
NPHP3_N
RPN1_RPN2_N
Flavi_DEAD
AAA_25
DO-GTPase1
MobB
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
AHN72423
LinkDB
All DBs
Position
complement(1539838..1541817)
Genome browser
AA seq
659 aa
AA seq
DB search
MLALLSQLKEKGIINAADYYFAEFIHRKQQPFHYASSIQNLAVLMAALCNFSYRQGNTCI
LLNHATEQDLFGLQDYFNERVYLTDIQQKIDYLPIERWQAALLAAQHIAFTAAPLQQIAP
LVLQFERLYFYRIWQDEFRIADYFKSAVRFQHVFSAEQTAQIAPILNRYFYEEQGIDWQK
IAVAMALRQRFCLITGGPGTGKTTTVTKLLLTLQELHQNGLRIKLVAPTGKAAARLTESI
VDAVDRLKQTFSTEKHEREIIENLRIPMNAETIHRLLGVRFFSEETRYHVDNPLPVDVLV
VDEASMIDLTLMAKLLNALKPETKLILLGDKDQLASVEAGGILGELGRFVNASAPTYSLV
MTRYLQATTGSSLAASDSVNPIGDSICYLQVSRRFGANPEVGALAAAVNSGDAVKSWQLL
QQYQQYQAKKCGVYLTDFAHYLNNKEDIQQRKTCVKLIVERAAEEYRRYLQLILQEGQMD
EEKVRSIFAAFNGIRFLAALRVGEFGVEQLNLAIAEKLRQKRLLQFHQEREWYIGKPIMV
TQNDGNVGLYNGDIGMYLGNGRVWFEQGQNSYKTVLASRVPNHETAFVMTVHKSQGSEFP
HTFLILPLENSPVLSKELVYTGITRTKDFLTVFALQSVWESAVKNPVQRQSGLGQLLEI
NT seq
1980 nt
NT seq
+upstream
nt +downstream
nt
atgttagctttattatcccaactcaaagaaaagggcatcatcaacgccgctgactattat
ttcgccgagtttattcaccgcaaacaacagccttttcactatgcatcgtctatccagaac
ctggcggtgcttatggcggcgttgtgcaacttcagttatcggcagggcaacacctgtatt
ttactgaatcacgccacggagcaggatttgttcggtttacaggattattttaacgaacgc
gtttatttaacggatattcagcaaaaaattgattatttgcccattgaacgctggcaggca
gccttgctggcggcgcaacatatcgctttcaccgccgcgcctttgcaacagatcgcgccc
ctggtgttgcagtttgagcgcttgtatttttatcgcatctggcaggatgagtttcgtatc
gccgattactttaaaagtgcggtccgttttcaacacgttttttcagccgaacagacggcg
caaatcgccccgattttgaaccgctatttttatgaagaacagggcatcgactggcaaaaa
atcgcggtggcgatggcattgcgtcaacgattttgcctcattaccggcgggccgggcacg
ggcaaaaccactaccgtcaccaaactcctattgaccttgcaggagcttcatcaaaacggc
ttgcgcattaaacttgtcgccccgacagggaaagcggcggcgcggcttacggaatccatt
gtggacgcggtagatcgcctgaaacagactttttccacggaaaaacacgagcgagaaatc
atcgaaaatctgcgcattcccatgaatgcggaaaccattcatcgcttgctcggcgtgcgt
tttttcagtgaggaaacccgctatcatgtcgacaatcctttgcccgtggatgtgttggtg
gtggacgaagcatccatgatcgatttaaccttgatggcgaagctgctcaatgcccttaaa
ccggaaaccaaattgattttattgggtgataaagatcagctggcttctgtagaagccggg
gggattttgggtgaattagggcgtttcgtgaatgcgtcggcgccgacgtatagcctcgta
atgacacgatatttacaggcgaccacgggcagttctcttgctgcgtcggatagcgtcaat
cctatcggtgatagcatttgttatttgcaggtcagccgccgtttcggggcaaatccggaa
gtgggtgcgttggcggctgcggtgaattcaggcgacgcggtgaaaagctggcagttattg
cagcaatatcagcaatatcaagcaaaaaaatgcggcgtatatttaacggattttgctcat
tatttaaataacaaagaagatattcagcaacgtaaaacctgcgtgaagctcatcgtggaa
cgtgcggcagaggaatatcgccgttatttgcagttgattttacaagaagggcagatggat
gaagaaaaagtgcggtcgattttcgcggcgtttaacggcattcgttttttagcggcgttg
cgtgtgggcgaattcggcgtggagcaattaaatctcgccatcgcagaaaaattacgccaa
aaacgcctgttgcaatttcatcaggaacgggaatggtacatcggcaaaccgattatggtg
acgcaaaatgatggcaatgtgggcttgtataacggtgacatcggcatgtatttgggaaac
ggacgggtatggttcgagcagggacaaaacagttataaaactgtgctggcaagccgcgtg
ccgaatcatgaaaccgccttcgtcatgacggtacacaaatcccaaggttcggaatttccg
catactttcctgattttgccattggaaaacagccccgtgttatccaaagaactggtttac
accggcatcacccgcaccaaggattttttaacggtgttcgcgctacaaagcgtatgggaa
agtgcggtgaaaaatccggtgcaacggcaaagcggattgggtcaattactggaaatctaa
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