Aggregatibacter actinomycetemcomitans HK1651: CF65_02480
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Entry
CF65_02480 CDS
T03184
Name
(GenBank) excinuclease subunit B, putative
KO
K03702
excinuclease ABC subunit B
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CF65_02480
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aah03400
]
CF65_02480
DNA repair and recombination proteins [BR:
aah03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CF65_02480
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
CF65_02480
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_22
AAA_30
eIF3_p135
DUF7018
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHN72592
LinkDB
All DBs
Position
complement(1716568..1718502)
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AA seq
644 aa
AA seq
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MAHQTLLGVTGSGKTFTIANVIAQLNRPAMVLAPNKTLAAQLYAEMKDFFPENAVEYFVS
YYDYYQPEAYVPSSDTFIEKDASINDQIEQMRLSATKSFLERRDTIVVASVSAIYGLGDP
DSYLKMMLHLQQGAIINQRQILAKLAELQYTRNDQAFQRGTFRVRGEIIDIFPAESDDRA
VRIELFDDEIERLSLFDPLTGSSFGTVPRFTVYPKTHYVTPRERILDAIEKIKLELAQRR
EYFIKENKLLEEQRISQRTQFDIEMMNELGYCSGIENYSRYLSGRNEGEPPPTLFDYMPS
DAILIIDESHVTVPQIGGMYRGDRSRKETLVEYGFRLPSALDNRPLRFEEFERLAPQTIY
VSATPGPYELEKSGGEIIDQVVRPTGLLDPQIEIRPVSIQVDDLLSEARHRADKNERVLV
TTLTKKMAEDLTDYLDEHGIRVRYLHSDIDTVERVEIIRDLRLGEFDVLVGINLLREGLD
IPEVSLVAILDADKEGFLRSERSLIQTIGRAARNLHGKAILYADNITKSMEKAITETNRR
REKQAKYNEAQGIVPQALNKKVGELLDIGQGANQKAKANKQRGKTVAEPTALYTTPKSPK
EYQQQIKKLEQQMYKFAQDLEFEKAAATRDQLQQLRESFMLSSE
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
ttggcacatcaaaccttgcttggggtaacaggttcaggcaaaacctttaccattgccaat
gtgattgcgcaattgaatcgccctgcgatggtgttggcaccgaacaaaacccttgccgcc
cagctttatgccgaaatgaaggattttttcccggaaaatgcggtggaatattttgtttct
tactatgattattatcagcccgaagcctatgtgccgagtagcgatacttttattgagaaa
gacgcgtctattaatgatcaaattgaacaaatgcgactttccgccacaaaatctttctta
gaacggcgcgatactattgtagtggcgtccgtgtccgctatttatggtttaggagacccc
gattcctatttaaaaatgatgctgcatttgcaacaaggcgcgattattaatcagcgccaa
atcttggcaaaattggcagagttgcaatatacccgtaatgatcaggcgtttcagcgcgga
acgttccgtgtacggggagaaattattgatattttcccggcggaatcggacgatcgggcg
gtacgtatcgaattatttgatgatgaaatcgaacgcttgagtttatttgatccgctcacc
ggcagcagcttcggcacggtgccgcgctttaccgtttatccgaaaacgcactatgtcaca
ccgcgcgagcgtatcttggatgccatcgaaaaaattaaactggaattggcgcaacggcgg
gagtatttcattaaagaaaataaattattggaagagcagcgtatcagccaacgtacccaa
tttgatattgagatgatgaatgaactcggttattgctcgggcattgaaaactattcccgc
tatttatcgggtagaaatgagggcgaaccgccaccgaccttatttgattatatgccgtct
gacgcaattttgattattgacgaatcccacgtcaccgtgccacaaatcggtgggatgtat
cgcggcgatcgctcccgtaaagaaaccttggtggaatatggttttcgtctgccttctgcg
ttggataaccgtccgttacgttttgaagaatttgaacgtttggcaccgcaaaccatttat
gtttccgccacaccgggaccgtatgaactggaaaaatccggtggggaaattatcgaccaa
gtagtgcgtccgacaggtttgcttgatccgcaaattgaaattcgcccggtatctattcag
gtggatgatttactttccgaagcacgccacagagcggataaaaatgaacgcgttttagtg
acgacattaacgaagaaaatggcggaagatcttaccgactatttagatgaacatggtatt
cgcgtacgttatttgcattctgatattgatactgtcgaacgggtggaaattattcgtgat
ttgcgcttgggggaatttgatgttttagtcggcattaacttattacgggaaggtttagat
attccggaagtgtctttagtggcaattttagatgcggataaagaaggttttttacgttcc
gagcgttcattaattcaaacgatcggacgtgctgcgcgaaatttacacggaaaagccatt
ttgtatgcggataatataaccaaatcaatggagaaagctattaccgaaaccaatcgtcgg
cgtgagaaacaagcaaaatataatgaagcacagggcattgtgccgcaggcattaaataaa
aaggtaggcgagttgttagatatcggtcagggtgccaatcagaaagccaaagccaataaa
caacgtggaaaaacggtggcagaaccgaccgcactttatacaacgccgaaatcaccgaaa
gaatatcagcaacagattaagaaacttgagcagcaaatgtataaatttgcacaggatttg
gaatttgagaaagctgctgcaacgcgcgatcagttacaacaattacgggaaagttttatg
ttatcaagtgagtaa
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