Aggregatibacter actinomycetemcomitans HK1651: CF65_02910
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Entry
CF65_02910 CDS
T03184
Name
(GenBank) ribonuclease E, putative
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
aah
Aggregatibacter actinomycetemcomitans HK1651
Pathway
aah03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aah00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CF65_02910
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aah03019
]
CF65_02910
03009 Ribosome biogenesis [BR:
aah03009
]
CF65_02910
Enzymes [BR:
aah01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
CF65_02910
Messenger RNA biogenesis [BR:
aah03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CF65_02910
Ribosome biogenesis [BR:
aah03009
]
Prokaryotic type
rRNA processing factors
CF65_02910
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
PNPase_C
S1
Motif
Other DBs
NCBI-ProteinID:
AHN72929
LinkDB
All DBs
Position
complement(2036274..2039165)
Genome browser
AA seq
963 aa
AA seq
DB search
MKRMLINATQKEELRVALVDGQRLFDLDIESLGHEQKKANIYKGKITRVEPSLEAAFVDY
GAERHGFLPLKEIAREYFPSGYVYQGRPNIRDIISEGQEVIVQVNKEERGNKGAALTTFV
SLAGSYLVIMPNNPRAGGISRRIEGDERLELKDALSSLDVPEGVGLIVRTAGVGKSPEEL
QWDLKVLLHHWEAIKQASQSRPAPFLIHQESDVIVRAIRDYLRRDIGEILIDSLQVYEKA
KAHIKLVRPDFINRVKLYQGEVPLFSHYQIESQIESAFQREVRLPSGGSIVIDVTEALTA
IDINSARSTRGGDIEETALNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVEN
RVRDAVRQDRARIQISRISRFGLLEMSRQRLSPSLGESSHHVCPRCQGTGKIRDNESLSL
SILRLLEEEALKENTKQVHTIVPVQIASYLLNEKRKAIHSIEKRHTVDILVVPNEAMETP
HFSVFRVRDGEEVNELSYNLARLHQGQDETLVAEESLISRNIDTTPAETPVVESAAVSLS
IPMPAPEPVERKEQSGPSLLSRLLAALKGLFASEPKQEEQNKKTRNNNRNSNNNRNRRNQ
ERRNNRRNRNDNAENVVEEQTAEKAERVESRNRNQERNAKRNRKPEVIEEVINSEASTPV
SEERVEPTQRRQRRDLRKKVRLNEEEMNEVPPSKSTVAQFAENTVVEPKAEEEIVVTDVI
DLDDNAEVDKGRDNSRQRRLPRHLRVNNQRRRRNTQEKSPMPLFAAVASPELASGKVWID
MGQSVQSKENSFLSVDELLEQQNQSDAGEPEQSITVTMPALDMIVEKSKNDVQPLTEFII
QPANDSVKKKVQASLQRLNNNVVSAPMEATAEVIVTMDVSDNVKFMDETDRTYVFNGRLG
TFSAVTHTKAEATLAKPSDTPITTYPVQEWQESRYYFYGKGAAGHHTAISHIYTEPTKAE
AVK
NT seq
2892 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagaatgttaatcaatgcgactcaaaaagaagagttgcgcgttgcgttagtcgat
gggcaacgcttattcgacctggacattgagagtctggggcatgaacagaaaaaagccaat
atttacaagggaaaaattactcgggttgagccgagtttggaagccgcttttgtggattac
ggtgcagaacgtcacggttttttaccgttgaaagaaattgcacgtgaatattttccgtcg
ggttatgtatatcaaggccgcccgaatattcgcgatattatctcggaagggcaggaagtc
attgttcaggtcaacaaagaagagcgcggtaataaaggtgcggcgctgaccacctttgtt
tccttggcagggagttatttggtgattatgccgaataatccgcgcgccggcgggatttcc
cgtcgtattgaaggcgatgagcgtttggagttaaaagatgcgttgagttctttggatgtg
cctgaaggcgtgggattaatcgtacgcaccgcgggcgtgggaaaatccccggaagaattg
caatgggacttgaaagtgctgttgcatcattgggaagccattaaacaagcgtctcaaagc
cgcccggcgccttttttaattcatcaggaaagtgatgttatcgtgcgtgccattcgcgat
tatttgcgtcgcgatattggtgaaatcctgattgatagcctgcaagtttatgaaaaagcc
aaggcgcacattaaattggttcgtccggatttcattaatcgagtgaaattataccaaggt
gaagtgccgttatttagccattatcaaattgagtcgcaaatcgaatcggcattccaacgt
gaagtgcggttgccttccggcggttctattgttattgatgtgaccgaagccttaacagcc
attgatattaactccgcccgttccacccgtggtggcgacattgaagaaaccgcgttaaac
accaaccttgaagctgccgatgaaatcgcccgtcaattgcgtttgcgcgacttgggcggt
ttaatcgtgattgactttattgatatgacgccggttcgtcatcagcgtgaagtggaaaat
cgggttcgtgatgcggtgcgccaggatcgggcgcgtattcaaattagccgaatttcccgt
ttcgggttgttggaaatgtcccgtcagcgtttgagtccgtcattaggcgaatcctctcac
cacgtttgcccgcgctgccaaggcaccggcaaaatccgtgataacgagtcactttccctt
tccattttgcgtttattggaagaagaagcgttaaaagaaaataccaaacaggttcacacc
atcgttccggtacaaatcgcgtcttacttactcaatgaaaaacggaaagccattcatagc
atcgaaaaacgccacactgtggatattctcgtggtgccgaatgaagctatggaaacaccg
cactttagtgtgttccgtgtgcgtgatggggaagaggttaatgaattaagttataactta
gccagattacatcaggggcaagatgagacccttgtagctgaagaatccctgatttcccgt
aacattgacaccacacctgcggaaacgccggtggtggaaagtgcggcggtttctttatcc
attccaatgccggcaccggaacctgttgagcgtaaagaacaaagcggtccgtctttgttg
agccgtttattggcggcgttaaaaggcttatttgcttccgaaccgaaacaggaagagcaa
aataagaaaacgcgtaataacaatagaaacagtaacaataatcgcaatcgacgtaaccag
gaacgtcgtaataatcgccgtaaccgtaatgacaatgcggaaaatgtggttgaagagcaa
actgcagaaaaggctgagagagttgaaagcagaaatcgcaatcaagagcgtaatgccaaa
cgtaatcgcaaacctgaagtaattgaagaggtgattaactctgaggcttccacaccggtt
agcgaagaaagggtagaaccgacacaacgtcgtcaacgtcgtgatttgcgcaaaaaagtg
cgtcttaatgaagaggaaatgaatgaggttccgccttctaaatcgacagtagcacaattt
gcagaaaacaccgttgttgagccaaaagcggaagaagagattgtagtaacggacgtgatt
gatcttgatgataatgctgaagtcgataaagggcgcgataattcacgtcaacgtcgtttg
ccacgtcatttgcgcgtcaataatcagcgccgtcgtcgcaatacgcaagaaaaatcgccg
atgccattatttgcggcagtggcttcaccggaattagcgagcggtaaagtgtggatcgac
atggggcagtccgttcaatcaaaagaaaatagcttcttatctgttgatgaacttcttgag
caacaaaatcaatctgatgcaggcgaaccggagcaaagtatcactgtcactatgccggcg
ttggatatgattgttgaaaaaagtaaaaatgatgttcagccattaacggaatttattatc
caaccggcaaatgattccgttaagaaaaaagtacaagcatcgttacaacgcttaaataac
aatgtggtatccgctccaatggaagcgacagctgaagtgattgtaacgatggatgtctct
gataatgtgaaattcatggatgaaactgaccgcacttatgtttttaacgggcgtctaggg
acattctcggcagtaacccacactaaagcagaagcgactttggcgaagccttccgataca
ccgattacgacttatccggtgcaagaatggcaggaatcccgttattatttctacggtaaa
ggcgcggcagggcaccacaccgcaatcagccatatttataccgaaccgactaaagcggaa
gcggtgaaataa
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