Glutamicibacter arilaitensis: AARI_13060
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Entry
AARI_13060 CDS
T01320
Symbol
sbcC
Name
(GenBank) putative nuclease SbcCD subunit C
KO
K03546
DNA repair protein SbcC/Rad50
Organism
aai
Glutamicibacter arilaitensis
Brite
KEGG Orthology (KO) [BR:
aai00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aai03400
]
AARI_13060 (sbcC)
DNA repair and recombination proteins [BR:
aai03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
AARI_13060 (sbcC)
Archaeal homologous recombinant proteins
AARI_13060 (sbcC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
SMC_N
AAA_29
AAA_15
AAA_21
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
CBT75513
UniProt:
E1VV59
LinkDB
All DBs
Position
1448757..1451828
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AA seq
1023 aa
AA seq
DB search
MRIHKLQIQAFGPFAGTEEINFDELAEGGLFLLDGPTGAGKSSILDAICYALYGALPGSR
TGSRQIRSDHAPTGLAPEVSCELTIGDRRFEVTRSPAWMRPSKRGKDKTTEQKASSLLRE
FTASGWNELSTRNDEVGHVLGSLLGLDREQFTKVVMLPQGGFADFLRAKAKDREDLLANL
FDTSDYAQIEEEFSARLAEERQKTESLEARLSASEEAIHAQAQSFLAGRESNAQDEASED
TEDSAQAAHATVAEQFADYQRRISVIHQRAASEAAALRAQRTGLREQVQSVEERQRIFAR
LAELRSKQAAYAQQHEAALSAGARLEKDAKAGAVRAYLTQLNEAKATEQKIKDTWLASQQ
WLEKEQGLAPRIDIAGLESLRRPAHEAAEALAIAKAALEDEKRREVLAAQGEKAAELVGV
HAKTRTEAEEEVLRLKTEREALEAQDLDQGAATEKVQQAKDRVLGLETKIGHATERDGLE
KKAMSAREKASAQELKIVDAANSLLDLRTEQLAQSALRLSAALEDGKPCMVCGSEEHPAP
AQADAGAPLIDDEQIQKLDAIVAAARVAGQQAAQTRDTLMAKLQAAQEAAGDQMVAELRV
ELEAAQAELEQARQKHNEISVRISKLDKVRRRVEEQNARAAQAVLEHSAAQHNAQTLQAQ
LEELDAKLVQLRQGKNSLSELVEQQTKTSNGLGNAFQNLRRLLEASQALERATATWDAER
TAAGFAQLAEYEAALLEASQREQLRQLQRADADLASAIATLESSEDCRKAQELSSQGIQA
PGEDELVEARLLATAADERFEAAREQEVLALTQLTRHEQATGDLERQRADAGPVIETYRR
LRGLAEVIRGGGENLYKMTLSTYVLAARLEEVAIAATQRLAVMSAGRYSLHHDDSKQGNA
KSGLGLQILDSWTGKRRETQTLSGGETFMASLALALGLADVISHHSGAVDMQTLFVDEGF
GSLDAETLEEVMQALENLRAGGRTIGLVSHVAEMKQRITNRVSVIKTQHGSTIAREGTVI
LAG
NT seq
3072 nt
NT seq
+upstream
nt +downstream
nt
gtgagaatccataagctgcagatccaggccttcggtccctttgcaggcaccgaagagatc
aactttgatgaattagccgaaggcggcctgtttctcctggatggccccaccggtgcaggc
aagtccagcatcttggatgcgatttgctatgcactgtacggcgcgttgcccggcagccgc
accggcagcaggcagatccgttcggaccacgcaccaacagggttggcaccagaagtcagc
tgcgaattgaccatcggtgaccgccgcttcgaggtcacccgctcaccggcgtggatgcgt
ccatccaaacgcggcaaggacaagaccactgaacagaaggcttccagcctgttgcgggaa
ttcaccgcttcgggttggaacgaactgtccactcgcaacgacgaggtggggcatgttttg
ggcagcctgctgggtctggaccgcgagcaattcaccaaggtcgtaatgctgccgcagggc
ggctttgccgacttcctgcgtgccaaggccaaggaccgcgaagatctgttggcgaatctt
ttcgataccagcgactatgcgcagattgaagaggaattctccgcccggctggccgaagag
cgccagaaaaccgaaagccttgaagcccggttgagcgccagtgaagaagccattcatgcc
caagcacagtccttccttgccggccgtgaatccaacgcgcaggacgaagcatccgaagac
accgaagatagtgcccaggcggcgcacgccacggtggccgagcagttcgctgattaccag
cgccggatctcggtgattcatcagcgtgcggccagcgaagcggcggccttgcgcgcgcag
cggaccgggttgcgagaacaggtgcagagtgttgaagagcgccagcggatctttgcccgg
cttgccgagctgcgcagcaagcaggccgcctatgcccagcagcatgaggcagccctgagc
gcaggggcacgcctggaaaaagatgccaaggctggcgccgtacgcgcctacctgacccag
ctgaatgaagcaaaggccactgaacaaaagataaaggacacctggcttgccagccagcag
tggcttgaaaaagagcaggggctggctccccgcatcgatatcgcaggtctggaatccttg
cgccgtccggcccacgaggcagctgaagcattggcaatagccaaggcagcgctggaagat
gagaagcgccgggaggtactggccgcccaaggagaaaaggccgccgagttagttggtgtc
catgccaagacccgcaccgaggctgaagaagaagtcctgcggctcaagactgaacgcgaa
gcgttggaagcacaagacctcgaccagggcgctgccaccgaaaaggtccagcaagccaaa
gaccgagtgctgggcctggagaccaagatcgggcatgcaaccgagcgcgatggccttgaa
aagaaggccatgagcgcacgggaaaaagccagtgcacaagagctgaagattgttgatgcc
gccaattccttgctggatctgcgcaccgagcagctggcacaaagcgctttgcgcctatcc
gccgcgctagaagatggcaagccatgcatggtctgcggttctgaagaacatcccgccccg
gctcaggccgatgcaggtgcgccgctcattgatgatgagcagatccagaaattggatgcc
atcgtggccgccgcacgcgttgccggccagcaggccgcgcagacccgcgacaccctgatg
gccaagttgcaggctgcccaggaagcagccggtgaccaaatggttgcagaactgcgcgtt
gaacttgaggcagcgcaggccgaacttgagcaagcacggcagaagcacaatgagatctct
gtgcgcatcagcaagctggataaggtgcgccgacgcgtcgaagagcaaaacgcccgtgcc
gcccaggcagtcctcgagcactcagccgcgcagcacaatgcgcaaacgctgcaggcccag
ttggaagagctggacgccaagctggtccagctgcgccaggggaagaacagcctcagcgaa
ctcgtcgagcagcagaccaaaacctctaacggcctgggcaacgcattccagaatttgcgc
cgcctgcttgaagccagccaagccctggaaagggcaacggccacgtgggatgccgagcgc
accgccgcaggatttgcgcagctggcggagtacgaagcggcactgcttgaagcttcacag
cgcgagcaattgcgccagctgcagcgtgccgatgccgatctggccagtgccattgccacg
ctggaaagctccgaagactgccgtaaggcccaagaactttcttcccagggaatccaagca
ccgggcgaagacgaactggtcgaagcgcgattgctggccaccgcggctgatgagcgtttc
gaggcagcacgtgagcaagaagtgctggcactgactcagttgacccgccacgagcaggca
actggggatcttgaacgccagcgggcagatgccgggccggtcatcgaaacctatcgcagg
ctgcgcggattggctgaagtgattcgcggcgggggagagaacctgtacaagatgacgctg
agcacctacgtgctggccgcacgcttggaagaagtggccatcgccgccacccagcgtctg
gcggtgatgtccgcaggacgctactcgctgcatcatgatgattccaagcaaggcaacgcg
aagtccggtctcggactccagatcctcgattcgtggactggcaagcgccgcgaaacccag
accctctccggaggcgagaccttcatggcttcgctggccctggctttgggcctggcagat
gtcatttcacatcactccggtgctgtggacatgcagacgctatttgttgatgagggcttt
ggctcgctggatgccgaaacgctggaagaagtcatgcaagcgctggaaaacctgcgtgcc
ggtggccgcaccatcggcctggtttcgcacgttgccgaaatgaagcagcgcatcaccaac
cgggtctcggtcatcaagacccagcatggttcaaccatcgcacgcgaaggcactgtgatc
ttggccggatag
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