Glutamicibacter arilaitensis: AARI_21360
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Entry
AARI_21360 CDS
T01320
Name
(GenBank) putative ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aai
Glutamicibacter arilaitensis
Pathway
aai03420
Nucleotide excision repair
aai03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aai00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AARI_21360
03430 Mismatch repair
AARI_21360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aai03400
]
AARI_21360
Enzymes [BR:
aai01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AARI_21360
DNA repair and recombination proteins [BR:
aai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AARI_21360
MMR (mismatch excision repair)
Other MMR factors
AARI_21360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
PhoH
Peripla_BP_2
Motif
Other DBs
NCBI-ProteinID:
CBT76356
LinkDB
All DBs
Position
complement(2430962..2434279)
Genome browser
AA seq
1105 aa
AA seq
DB search
MSNIRFTPQELSEALGEQFPPTAQQAEIVAAPLEPMLVIAGAGSGKTKTMADKVVWLVAN
QLVRPEEILGVTFTRKAAGELSIRIRAKIAQLVATGLLSAEETRDFLDPSVSTYHSYANT
LVQDHGLRLGLEEDSALLGAAQSWQVAHSVLEKYTGSYEHLNSATSTLIDAIVSFSSEAS
EHLVTAPYAHQWIDDLVERLRTLPMDAEKPKKTTQAAIKLIDKLASRATIAELAEEYASE
KKRLGVMDYGDLVAHAARIAQEVPAAALAERASHKVVLLDEFQDTSHAQMVLFSQLYGQG
HPVTAVGDPNQSIYGFRGASAGQLFRFPEVFPINGENRNDVAHVKHLTIAWRNTVNVLAA
ANSITAAAPQHQGPVSVKPLDSSAHAKPGRVVLNRCATVREEAEAIAEMIAAENRKAAEP
KTSAVLSRNRTQLSIMGEVLAERGIKYQLVGLSGLLSTPELTDLVSYLHVLVDPLRSDKL
MRILAGARWRLGTADLMAFADWSRQLERRRAHGLQSTPAADESASSDEDVLKEAARAELN
DAASLVEALDFLPKEGWTSSDGRTISPAGYERLAALRDELAGLRLLANDDLETLIRETER
AMNLDIEVAARPWISRDKARANLDAFADVVREYCRNAPRVELAGFLMWLEQAAEKEKGLP
LPSEDADPSAVQLLTVHASKGLEWDIVAVMTLNDGVFPGSKSDRWTSGDKALPWELRGDH
KDLPQWDTDQPTLKELLEAESIFKDRVEDHHIAEERRLAYVAVTRAKSLLICSSSVWTST
RTKPTAPSEFFNCLVPLAEGENPQAEIGVWVEDEDAPEQNPSTLTPLEAVWPYDPLEGPV
ITGGVQKTPHPYSRREVIAEMAKNLEVVSQEHEPLTSFGQQWAEEAGKLLGQREFLAGRE
RRIEAPEHVRASLFVELAEDPVEVLENLRRPVPRRPGLAARRGTAFHAWIEEFYEKTSML
DLGDLQEPADGYLDEALDLESMKEAFLSSEWSKLQPAYVEVPLETRVGPVAVRGRIDAVF
QMEDGTWLMLDWKTGRVPSGKDLKSKLVQLAVYRLGWSRLHGIPLEEIKAAFYYVAAGIT
IHAEYLHNEQELEHMISSAFDQLSN
NT seq
3318 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatatcagattcaccccgcaagaactctccgaagccctaggcgagcagttccca
cccacagcccagcaggcagaaattgttgctgccccgctggaacccatgctggtgatcgca
ggagccggttcgggaaagaccaaaaccatggccgacaaggttgtctggctggtagccaac
cagctggtccgcccggaagaaatcctcggggtgacctttacccgcaaggccgctggcgag
ctgtccatccgcatccgtgccaagattgcccagctggtggccaccggactgctcagcgca
gaagaaaccagagactttctggacccctccgtctccacctaccactcctacgccaatacg
cttgtccaagaccacgggctgcgccttggcttggaagaagacagcgcactgctcggggca
gcacaatcatggcaagtagcccactcggtactggaaaaatacaccggcagctatgaacac
ctcaacagcgccaccagcaccttaatcgatgccatcgtgtccttcagctccgaagcttca
gaacatctggtcaccgcgccatatgcacatcaatggatcgatgacctggtcgaaagattg
cgcaccctgccaatggacgcagaaaagccgaagaagactacccaggcagccattaagctc
attgacaagctcgcctcacgcgccaccatcgcggagctggctgaagaatatgcctcggaa
aagaagcgcctgggcgtgatggactacggggacctggtagcccacgccgctcgcattgcc
caggaagtgccagccgctgcgctcgccgaacgagccagccacaaggtggtacttcttgat
gaattccaggacacctcgcacgcgcaaatggtgctcttctcccagctctatggccaaggc
catccggtcaccgcggtgggtgaccccaaccaatccatttacggattccgcggggccagc
gccggccagctattccgcttcccagaagtcttcccaatcaatggcgaaaacagaaacgac
gttgcccatgtaaagcacctgaccatcgcgtggcgcaatactgtcaacgtgcttgcagcg
gccaacagcatcactgccgcagcaccccaacaccagggcccggtctcggtcaagccgttg
gattcttcggcgcatgccaagcccggtcgcgtggtgctcaaccgttgtgcaacggtgcgt
gaagaagcagaagccattgcagagatgattgctgccgagaataggaaggccgccgagccg
aagaccagcgcggtgctctcacgcaaccgcacccagctgagcatcatgggcgaagtactg
gcagaacgcggcatcaaataccagctggtgggcctgtccggattgctgagcaccccggaa
ctgaccgacctggtctcgtacctgcatgtgctggttgaccccctgcgctccgataagctc
atgcggatcttggccggggcacgctggcggttgggaaccgcagacctgatggccttcgcc
gactggtcccgccagctggagcgccgccgggcccacggcctgcagtcaaccccggcagcc
gatgaaagcgcatcgagcgatgaagatgtgctcaaggaggcagcacgcgccgaactcaac
gatgcggccagcctggttgaagcactggacttcctgcccaaagaaggctggacgagcagt
gacggcagaactatcagccccgctggctatgaacggctagcggctctgcgtgatgaactt
gccggcttgcggctactggccaatgatgatctggagacgctgatccgcgaaaccgaacgc
gccatgaatctcgacatcgaggtagcggccaggccctggatctccagggacaaggcccgg
gccaacctcgatgcgtttgccgacgtggtgcgcgaatattgccgcaatgcgccacgcgtg
gagctggctggtttcctgatgtggttggaacaggctgccgaaaaggaaaaaggtctccca
ctgccaagtgaagacgcagatcctagcgcggtgcagctgctgacggtccacgcctcaaag
ggacttgaatgggacatcgtggcggtgatgaccctcaacgacggggtattccccggttct
aaatccgaccgctggaccagtggagacaaagcgctgccatgggaattgcgtggagatcac
aaggacctgccccaatgggacaccgaccagccgacgttgaaagaactgctggaagccgag
tcgattttcaaggatagggttgaagaccaccatattgccgaagaacgccgcttggcctac
gttgcggtgactcgcgcgaagtccttgctcatttgcagcagcagcgtctggaccagtacg
cgtaccaagccgactgcgccatcagaattcttcaactgcttggtcccgttggctgaaggg
gaaaatcctcaagctgaaattggagtctgggttgaagatgaggatgctcctgagcaaaac
ccgagcaccttgacgccgcttgaagctgtgtggccctatgacccgctggaagggccagtc
atcaccgggggagtgcaaaagactccccacccgtattcgcgccgcgaggtcatcgctgag
atggccaagaatcttgaagttgtttcccaagagcatgagccgctgaccagcttcggccag
cagtgggctgaggaagctggcaagctcctagggcaacgcgaattcctggccgggcgtgaa
cgccgcattgaagcacccgagcacgtgcgcgcttcgctgttcgttgagctggctgaagac
cctgtggaggtattggaaaaccttcggcgcccagtgccgcgccgtccagggcttgccgcc
cgacgcggtaccgcgttccacgcctggattgaagagttctacgagaaaacttcgatgctg
gatctgggagatcttcaggaaccagccgacggctaccttgatgaggccttggatcttgaa
tccatgaaggaagccttcttgtccagtgaatggtccaagctgcagccggcctatgtcgag
gttcctttggagacccgcgtggggccggtggctgtgcgtggccgcattgatgctgtcttc
cagatggaagatggcacatggctgatgctcgactggaagaccggacgtgttcccagcggc
aaggacctgaagagcaaactagtccagctggccgtataccggctcggctggtctcgtctg
catggaatcccactagaggagatcaaggccgcgttctactacgtggcagcgggcatcact
atccatgccgaatacctgcataatgagcaggagcttgaacacatgatctccagcgccttc
gaccagctcagcaactag
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