Glutamicibacter arilaitensis: AARI_23590
Help
Entry
AARI_23590 CDS
T01320
Symbol
rpoC
Name
(GenBank) DNA-directed RNA polymerase beta prime chain
KO
K03046
DNA-directed RNA polymerase subunit beta' [EC:
2.7.7.6
]
Organism
aai
Glutamicibacter arilaitensis
Pathway
aai03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aai00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
AARI_23590 (rpoC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aai03021
]
AARI_23590 (rpoC)
03400 DNA repair and recombination proteins [BR:
aai03400
]
AARI_23590 (rpoC)
Enzymes [BR:
aai01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
AARI_23590 (rpoC)
Transcription machinery [BR:
aai03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
AARI_23590 (rpoC)
DNA repair and recombination proteins [BR:
aai03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
AARI_23590 (rpoC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-ProteinID:
CBT76578
LinkDB
All DBs
Position
complement(2658728..2662618)
Genome browser
AA seq
1296 aa
AA seq
DB search
MSSDSSFGLMRINLATADEIRGWSYGEVKKPETINYRTLKPEKDGLFCEKIFGPSRDWEC
YCGKYKRVRFKGIICERCGVEVTRANVRRERMGHIELAAPVTHIWYFKGVPSRLGYLLDL
APKDLEKVIYFAAYMITSVNEERRHAEMPNLQAQHDLELRNLANNAEADKKAVAADLEAE
LERMEADGAKNAELNKARTLAEKTVLQIDKRAKAEAERLRAVWERFKTLKVADLEGDEGL
YRTMREKYGLFFEGSMGAEAIQKRLENFDLAGEAEELKTIIENGKGQKKARALKRLKVVN
AFLVNGNSPKGMVLDAVPVIPPELRPMVQLDGGRFATSDLNDLYRRVINRNNRLKRLLDL
GAPEIIVNNEKRMMQEAVDSLFDNGRRGRPVTGPGNRPLKSLSDMLKGKQGRFRQNLLGK
RVDYSGRSVIVVGPQLKLHQCGLPKQMALELFKPFVMKRLVDLNHAQNIKSAKRMVERYR
PQVWDVLEEIITEHPVLLNRAPTLHRLGIQAFEPQLIEGKALQLHPLVCGAFNADFDGDQ
MAVHLPLSPEAQAEARILMLSSHNILKPSDGRPVAQPSQDMIIGLHHLTTKRANEVGAGR
VFATVSEAIMAKDLGELHLNAPIKVRVENFVPSADQPAPEGWEPGTPALLDTSLGQVLFN
DTLPADYPWVATVAGKDALSEIVNDLAERYPKIIAAATLDNLKDAGFYWSTRSGVTVAIS
DITSNMDKAAILAPYEEKAAKVQASYDKGLIADTERRQDLIDIWTKATDEVAEAMKNGME
ELNTINRMVTSKARGNYLQLRQIAGIRGLVSNPKGEIIPRPIKSSYREGLSVLEYFIATH
GARKGLADTALKTANSGYLTRRLVDVSQDVIVREEDCGTKRGLTVAIADNTAGIRIKHET
VENSAYTRTLATDVKNAEGTVLATAGSDVGDALIDELYAAGVDEIRVRSVLTCDSAVGTC
ALCYGRSLASGKTVDIGEAVGIIAAQSIGEPGTQLTMRTFHTGGVASADDITQGLPRIQE
LFEARTPKGVAPMSEVTGRVSIEDDEKQLRVVVTPDNGDEKQAYPVLRRARLLVEEGESI
VAGTQLTSGTLDPKQVLRVLGPREAQKFLVREVQDVYQSQGVGIHDKHVEVIVRQMLRRV
TVIESGETDLLPGELADRSRFTAANRKAVSEGKRPAAGRDEMMGITKASLATDSWLSAAS
FQETTRVLTQAAMEGKEDPLRGLKENVIIGKLIPAGTGLDRYTQVNVEPTDEAKATLFTG
TSAFSSGLYDDALEGGLSPEFRAISMDDYDHGSDFR
NT seq
3891 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgattcctcattcggcctcatgcgaatcaaccttgccaccgcggatgaaatc
cgtggatggagctacggcgaggtcaagaagccggaaaccattaactaccgcaccctgaag
ccggagaaggacggtcttttctgcgaaaagatcttcggcccttcccgtgactgggaatgc
tactgcggtaagtacaagcgcgtgcgcttcaagggcatcatctgcgagcgttgtggcgtt
gaggtgacccgtgcgaacgttcgtcgtgaacgcatgggccacatcgagcttgctgctcca
gtgacccacatctggtacttcaagggcgttccatcgcgcttgggctacctgcttgatctg
gctccgaaggacctcgaaaaggtcatctacttcgctgcctacatgatcacttcggtcaac
gaagagcgtcgccacgccgaaatgcctaacctgcaggcccagcacgatctggaactgcgc
aaccttgcgaacaacgcagaagctgacaagaaggctgttgcagccgacttggaagccgag
ctggagcgcatggaagctgacggcgccaagaacgcggagctgaacaaggcccgcaccctg
gctgagaagaccgtgctgcagatcgacaagcgcgctaaggctgaagccgagcgtctgcgt
gcagtatgggaacgcttcaagaccctgaaggtcgctgaccttgaaggcgatgaaggcctg
taccgcaccatgcgtgagaagtacggactgttcttcgaaggctccatgggtgcagaagcc
atccagaagcgcctagagaacttcgacttggccggcgaagctgaagagctgaagaccatc
atcgaaaacggcaagggccagaagaaggctcgtgcactgaagcgcctgaaggttgttaac
gccttcttggtcaacggcaactcgcctaagggcatggtccttgacgccgttccggtgatc
ccaccagaactgcgcccaatggtccagctcgacggtggccgtttcgctacctcggacctc
aacgacctgtaccgtcgcgtgatcaaccgcaacaaccgcctcaagcgcctgcttgatctc
ggtgcgccagagatcatcgtgaacaacgaaaagcgcatgatgcaggaagctgttgactcg
ctgttcgataacggtcgtcgtggccgtccggtcaccggtccgggcaaccgtccactgaag
tccctgagcgacatgctcaagggcaagcagggtcgtttccgccagaacctgctcggcaag
cgcgttgactactcgggccgttcggtcatcgtggttggcccgcagctgaagctgcaccag
tgtggtctgcctaagcagatggctctggaactgttcaagcctttcgtgatgaagcgcctg
gttgacctcaaccatgcacagaacatcaagtcggctaagcgcatggttgagcgctaccgt
ccacaggtttgggatgttctcgaagagatcatcaccgagcacccggtactgctgaaccgt
gcaccgaccctgcaccgcttgggcatccaggccttcgagccacagctcattgaaggtaag
gcactgcagctgcacccactggtgtgtggcgcgttcaacgctgacttcgacggtgaccag
atggcagtacacctgccgctgagcccagaagcacaggctgaagcacgcatcttgatgctg
tcctcgcacaatatcttgaagccttccgatggccgcccagtggcacagccttcgcaggat
atgatcatcggtctgcaccacttgaccaccaagcgtgccaacgaagttggcgccggtcgc
gtgttcgcaaccgtttccgaggccatcatggccaaggatctgggagagctgcacctgaat
gcaccgatcaaggtccgcgtggagaactttgttccttcggcagaccagccggcccctgag
ggctgggagccaggtaccccggcattgctggatacctcgcttggccaggtgctgttcaat
gacaccctgcctgcggactacccttgggtagccaccgtagctggcaaggatgcactctcg
gagatcgtcaacgatctggcagagcgctacccgaagattattgccgcagccaccctggat
aacctgaaggacgccggtttctactggtcgacccgctcaggtgtcaccgtggcgatctcg
gacatcacctcgaacatggacaaggcagccatcttggctccttacgaggagaaggccgcc
aaggtccaggcttcctacgacaagggtctgattgcagataccgaacgtcgccaggacctg
atcgacatctggaccaaggctaccgatgaggttgccgaggccatgaagaacggcatggaa
gagctgaacaccattaaccgtatggtgacttccaaggctcgtggtaactacctgcaattg
cgtcagattgccggtatccgtggcctggtgtccaaccctaagggtgaaattattcctcgc
ccgatcaagtcttcctaccgtgaaggcctgtcggttctggagtacttcatcgcaacccac
ggtgcgcgtaagggcctggccgataccgcactgaagaccgcaaactccggttacctgacc
cgtcgtctggtagacgtttcgcaggacgttatcgtccgcgaagaggactgcggtaccaag
cgcggcttgaccgttgccattgcagataacactgcaggcatccgcatcaagcacgaaacc
gtggagaactcggcttacacccgtacgctggctaccgacgtgaagaacgccgaaggcacc
gtactggctaccgccggttcggatgtgggcgatgcgctgatcgacgaactgtacgctgca
ggcgtggatgaaatccgcgttcgctccgtactgacctgtgattcggctgttggaacctgt
gcactgtgctacggccgttcgctggcatcgggcaagaccgtggacatcggcgaggctgtt
ggcattatcgccgcacagtccatcggtgagcctggtacccagctgaccatgcgtaccttc
cacaccggtggtgtagcgtcggctgacgatatcacccagggtctgcctcgtatccaggaa
ttgttcgaagcccgtacccctaagggtgtggctccgatgtctgaggttaccggtcgcgtg
tcgatcgaagacgacgaaaagcagctgcgtgttgtagttactccagacaacggcgacgag
aagcaggcctacccggttctgcgtcgtgctcgcctgttggttgaagagggcgaaagcatc
gtagcaggtacccagctgaccagcggtaccctggatccgaagcaggttcttcgagtcctg
ggcccacgtgaagcgcagaagttcctggtccgcgaagtccaggatgtgtaccagtcccag
ggtgtaggcatccacgataagcacgtggaagtcatcgtccgccagatgctgcgtcgcgtc
accgtgatcgagtccggcgagaccgacttgctgccaggcgagttggccgatcgttcgcgc
ttcaccgctgcgaaccgcaaggccgtttcggaaggcaagcgtccagctgccggccgtgac
gagatgatgggtattaccaaggcatcgctggccaccgattcgtggctgtcggctgcttcc
ttccaggaaaccactcgcgtcctgactcaggctgcgatggaaggcaaggaagatccactg
cgcggtctgaaggaaaacgtgatcatcggtaagctgatcccggccggtaccggtctggat
cgctacacccaggtcaacgttgagcctaccgacgaagcaaaggcaactttgttcaccggt
acctcggccttctcctcgggtctgtacgacgatgcattggaaggcgggctgtcgcctgaa
ttccgtgccatctcgatggacgactacgaccacggctcggacttccgctaa
DBGET
integrated database retrieval system
