Aeromonas hydrophila MX16A: BOQ57_05770
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Entry
BOQ57_05770 CDS
T04629
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
aaj
Aeromonas hydrophila MX16A
Pathway
aaj03030
DNA replication
aaj03430
Mismatch repair
aaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BOQ57_05770
03430 Mismatch repair
BOQ57_05770
03440 Homologous recombination
BOQ57_05770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aaj03032
]
BOQ57_05770
03400 DNA repair and recombination proteins [BR:
aaj03400
]
BOQ57_05770
Enzymes [BR:
aaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BOQ57_05770
DNA replication proteins [BR:
aaj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BOQ57_05770
DNA repair and recombination proteins [BR:
aaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BOQ57_05770
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
APJ17456
LinkDB
All DBs
Position
1207108..1210587
Genome browser
AA seq
1159 aa
AA seq
DB search
MAEPRFIHLRVHSDFSMVDGLQKINPIVGAAAANNMPALALTDQMNMCGLVRFYGAAHGK
GVKPIVGADFWVQSDELGDEQFRLTLLAMDNDGYQNITLLISRGYQRGHVQGRPVIDKAW
LAEHAKGVIVLSGGREGDVGKFLLKGNRQMTEQCLAFYQGHFPDAYYLELLRTGRPDEEV
YLHMAVAIATEFALPVVATNEVVFLTADDFDAHEIRVAIHDGYTLMDKRRPRRYSPQQYL
RSQEEMAELFADIPEALENTVEIAKRCNVTVRLGEYFLPNFPTGDMTTEDFLVMKSKEGL
EERLEFLFPDPAVRAERRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGIPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMDRRDEVIDHVSE
MYGREAVSQIITFGSMAAKAVVRDVGRVLGHAYGFVDRISKLIPPDPGMTLAKAFEAEPK
LPELYEQDEEVKDLIDMARRLEGVVRNAGKHAGGVVIAPTKITDFAPLYCDDEGHHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIIDWALGMINPRLAKEGKPPVDIAAIPIDDKRSFDLL
QRYETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIERKHGKEA
ISYPDEKWQHESLQPILEPTYGIILYQEQVMQIAQTLAGYTLGGADMLRRAMGKKKPEEM
AKQRAGFEEGAVKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKTHFPA
EFMAAVMTADMDNTDKIVTLVDECQRMGLTVIPPDVNTGRYRFSVNEDGHIVYGIGAVKG
VGEGPIDAILEARDRDGPFRDLFDFCNRVDIKKLNKRVMEKLILSGAMDRLGPHRAALMA
TLEEAMRAAEQHAKAQAVGQVDMFGVLTEEIDDVKKAFANVPHWPDKVWLEGERETLGLY
LTGHPINQYSGELRRYTSGRLCDLHPTSRDTVTTAAGLVIAARSMVTKRGNKMGIFTLDD
RSGRLDVTLFSEALEKYEELMQKDRILVVSGQVSFDDFSGGLKMSARELLDINDARERFA
RAIRISLDEQQIDDRFFPRLCEILEPARAGVCPVQVNYRRPGSRVRLTLGTEWRVTPTDQ
LIDDLRVLLGRERVELVFD
NT seq
3480 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccccgttttatccacctgcgggtccactccgacttctccatggtcgacggc
ctgcagaagatcaatcccatcgtcggcgcggcggcggccaacaacatgccggcgctggcg
ctgaccgaccagatgaacatgtgtggcctggtgcgcttctacggtgccgcccacggcaag
ggcgtcaagcccatcgtcggggccgacttctgggtgcagagtgacgagcttggcgacgag
cagttccgcctcaccctgcttgccatggacaacgacggctaccagaacatcacattgctc
atctcccgcggctatcagcgcggtcacgtgcaggggcgcccggtcatcgacaaggcttgg
ctggccgagcacgccaagggagtgatcgtcctctccggcgggcgcgagggggacgtgggc
aagttcctgctcaagggcaaccgccagatgaccgagcagtgtctcgccttctatcagggc
cacttccccgacgcctattatctggagctgctgcgtaccggccgccccgatgaagaggtc
tacctgcacatggcggtggccattgccaccgagttcgcactgccggtggtggccaccaac
gaggtggtgttcctcaccgccgatgacttcgacgcccacgagatccgggtcgccatccac
gacggctataccctgatggacaagcgccgcccgcgccgttacagcccacagcagtacctg
cgcagccaggaggagatggcggagctgtttgccgacatccctgaggcgctggagaacacg
gtggagatcgccaagcgctgcaacgtgacggtgcgcctcggcgaatacttcctgcccaac
ttcccgaccggtgacatgaccaccgaagacttcctggtcatgaagtcgaaagaggggctg
gaggagcgacttgaattcctgttcccggatccggccgtgcgggccgagcgccgtcccgag
tatgacgagcggctcgacatcgagctcaaagtgatcaaccagatgggcttcccgggttac
ttcctcatcgtgatggagtttatccagtggtccaaggacaacggcattcccgtcggcccg
ggccggggctcgggggcgggttccctggtggcctacgcactcaagatcaccgatctggat
ccgctggaatttgacctgctgttcgaacgtttcctgaaccccgagcgggtatccatgccc
gacttcgacgtcgacttctgcatggacagacgggacgaggtgatcgaccacgtctccgag
atgtatggccgggaagcggtatcgcagatcatcaccttcggcagcatggcggccaaggcg
gtggtgcgggacgtgggccgggtgctgggccacgcttacggttttgtggatcgcatctcc
aagctgatcccgccggatccgggcatgacgctcgcaaaggcattcgaagccgagcccaag
ttgccggagctctacgagcaggacgaggaggtcaaggacctcatcgacatggcccgccgg
ctggaaggggtggtgcgcaacgccggtaaacacgccggtggcgtggtgatcgcgcccacc
aagatcaccgacttcgcgccgctctactgcgatgacgaaggccatcacccggtcacccag
ttcgacaagaacgacgtggagtacgccgggctggtgaagttcgacttcctgggcctgcgc
acgctcaccatcatcgactgggcgctcggcatgattaacccgcgccttgccaaagagggc
aagccgccggtcgacatcgccgccatccccatcgacgacaagcgctcgttcgacctgctg
cagcgctacgagaccaccgcggtattccagctggaatctcgcggcatgaaggatctcatc
aagcggctgcagcctgactgcttcgaagacatgatcgctctggtggcgctgtttcgcccg
ggcccgctgcagtcgggcatggtggacaacttcatcgagcgcaagcacggcaaggaggcc
atctcctatccggacgagaagtggcagcacgaaagcctgcagccgatcctggagcccacc
tacggcatcatcctctatcaggagcaggtgatgcagattgcccagaccctggcgggttat
acgctgggtggcgcggacatgctgcgccgggcgatgggcaagaaaaaacccgaagagatg
gccaagcaacgggccggctttgaggagggcgcggtcaagaacggtgtcgacggcgaactg
gcgatgaagatcttcgatctggtggagaagtttgcgggctacggcttcaacaaatcccac
tctgccgcctatgcgctggtctcctaccagaccctctggctcaagacccacttcccggcg
gagttcatggcggcggtgatgaccgccgacatggacaacaccgacaagatagtgaccctg
gtggacgagtgccagcggatggggctgaccgtgatcccgccggatgtgaacaccggtcgc
taccgcttcagcgtcaacgaagatggtcacatcgtctacggcatcggcgcggtgaagggg
gtgggggaaggccccatcgatgcgatcctggaagcgcgggatcgggacggcccgttccgc
gatctgttcgacttctgcaaccgggtcgacatcaagaagctcaacaagcgggtgatggag
aagctcattctctccggcgccatggaccggctcggcccccaccgcgccgccctgatggcg
actctggaggaggcgatgcgcgccgccgagcaacacgccaaggcgcaggcggtgggtcag
gtcgacatgttcggcgtgctcaccgaagagatagacgacgtcaagaaggcgttcgccaac
gtgccgcactggcctgacaaggtgtggctggaaggggagcgcgagaccctcgggctctac
ctcaccggtcaccccatcaaccagtacagcggcgagctgcgtcgttatacctcgggccgg
ctgtgcgatctgcaccccacctcccgcgataccgtgaccacggccgcaggcttggtgatt
gcggcgcgcagcatggtgaccaagcgtggcaacaagatggggatctttaccctggacgac
cgttccggtcgcctcgatgtgaccctgttcagtgaagcgctggaaaagtatgaagaattg
atgcaaaaagaccgtattttggtggtttctggacaggtcagctttgatgacttctccggt
ggccttaaaatgtcggcccgtgaattactggatatcaacgatgcgagagagcgttttgcc
agggcgatccgcatctctctcgatgaacagcagattgatgatcgttttttcccgcgtttg
tgcgagattttggaacccgcccgtgccggagtttgtccggttcaggtaaactatcgtcgc
cccggctcccgggtgcgattgacgctcggtaccgagtggcgggtgacgcccaccgatcaa
ctgatagatgacttgcgcgtcctgcttggacgagagcgggttgaattggtttttgattag
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