Aeromonas hydrophila MX16A: BOQ57_09340
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Entry
BOQ57_09340 CDS
T04629
Name
(GenBank) exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
aaj
Aeromonas hydrophila MX16A
Pathway
aaj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
BOQ57_09340
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaj03400
]
BOQ57_09340
Enzymes [BR:
aaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
BOQ57_09340
DNA repair and recombination proteins [BR:
aaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
BOQ57_09340
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOQ57_09340
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOQ57_09340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
WSS_VP
Motif
Other DBs
NCBI-ProteinID:
APJ15117
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All DBs
Position
complement(1987548..1988975)
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AA seq
475 aa
AA seq
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MSTSSKQTTQPTYYFHDYETFGISPAKDRPAQFAGIRTDGDFNLIGEPLVIYCKPPADYL
PEPEACLITGITPQKAMKDGLCEADFIRQIHEQFATPGTCVLGYNSIRFDDEVTRYTLYR
NFYDPYAYAWQNGNSRWDILDMLRACYALRPEGIEWAFDEEGKPSFKLEKLTVANGVTHA
NAHDALSDVLATIEMAKLVKKAQPKLFGYLFDLRNKNKVKALIDVVTMKPLVHVSGMFSP
WQGCASWVSPLAWHPSNQNAVIMVDLTRDPTPLIELTSEEIRERLYTKKEELGDLAGIPV
KLVHINKCPVLAPAATLTAERADQLGIDREQCRKSLDLLRAHPEVREKLVEVFNQEFAGN
NDGDPDTQLYAGFFGHGDKSTMDLVRATPADLLGEREFAFTDSRLPEMLFRYRARNWPHT
LSEAEQKRWRLHCSDYFSRRLPDYVPRLEELAEQNQGNERNFAILKSLYHYLENL
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgagcacatcatcgaagcaaaccacccagcccacttactacttccacgactacgagacc
ttcggcatcagcccggccaaggacagaccggcgcagtttgccggcattcgtaccgacggg
gatttcaacctcatcggcgagccgctggtcatctattgcaagccgcccgctgactatctg
ccggagccggaggcgtgcctgatcaccggcatcacgccgcaaaaggcgatgaaggacggg
ctgtgcgaggcggatttcatccgtcagatccacgagcagttcgccactccgggcacctgc
gtgctgggctacaacagcatccgcttcgatgacgaggtgacccgctacaccctctatcgc
aacttctatgacccctatgcctacgcctggcagaatggcaactcccgctgggacattctc
gacatgctgcgggcctgctacgccctgcgcccggagggaatcgagtgggcgtttgacgaa
gagggcaagccaagcttcaagctggagaagctcaccgtcgccaacggcgtgacccacgcc
aacgcccacgatgcgctctccgacgtgctggccaccatcgagatggccaagctggtgaaa
aaggcccagcccaagctgtttggctacctgtttgaccttcgcaacaagaacaaggtgaag
gccctcatcgacgtggtgaccatgaagccgctggtgcatgtctccggcatgttctccccc
tggcaggggtgcgcaagctgggtctcgccgctcgcctggcaccccagcaaccagaacgcg
gtgatcatggtggatctgacccgcgaccccaccccgctcatcgagctcaccagcgaggag
atacgcgagcgcctctacaccaagaaagaggagctgggggatttggccggtattccggtg
aagctggtgcacatcaacaagtgcccggtgctggcgccggccgccaccctgacggcggag
cgtgccgaccagcttggcatcgaccgggagcagtgccgcaagagcctggatctgctgcgc
gcccaccccgaagtgcgggaaaaactggtggaagtgttcaatcaggagtttgccggcaac
aatgacggcgacccggatacccagctctacgccggcttcttcggtcacggcgacaagtcc
accatggatctggtgcgcgccaccccggcggatctgctgggcgagcgggagtttgccttc
accgactcacggctgccggagatgctgttccgctaccgtgcccgcaactggccacacacc
ttgagcgaagcggagcaaaagcgctggcggctgcactgcagcgactacttcagccgccgt
ctgcccgactatgtaccgcgcctcgaggaactggccgagcagaatcagggtaacgaacgg
aactttgccatcctcaagagcctctatcactacctcgaaaatctgtga
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