Aeromonas hydrophila MX16A: BOQ57_16890
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Entry
BOQ57_16890 CDS
T04629
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
aaj
Aeromonas hydrophila MX16A
Pathway
aaj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
BOQ57_16890
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aaj03019
]
BOQ57_16890
03016 Transfer RNA biogenesis [BR:
aaj03016
]
BOQ57_16890
Enzymes [BR:
aaj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
BOQ57_16890
Messenger RNA biogenesis [BR:
aaj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
BOQ57_16890
Transfer RNA biogenesis [BR:
aaj03016
]
Prokaryotic type
tRNA degradation factors
BOQ57_16890
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
KH_2
S1_RRP5
CsrA
OB_RRP5_4th
LppA
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
APJ16504
LinkDB
All DBs
Position
complement(3697501..3699639)
Genome browser
AA seq
712 aa
AA seq
DB search
MNPIVKSFQYGQHTVTLETGVMARQATAAVMVSMDDTCVFVTVVGKKEADHGRDFFPLTV
NYQERTYAAGRIPGGFFRREGRPSEGETLISRLIDRPIRPLFPEGFLNEVQVVATVMSVN
PAVSPDIVAMIGASAALAISGIPFGGPIGAARVGYMNGQYVLNPTTTELPQSDLDLVVAG
TANAVLMVESEAAILSEEVMLGAVVFGHEQMQAVINAINEFAADVGTKPWNWTAPAVNEA
LKAKVAELATAELGEAYRITEKAVRYETIGAIKARVVEQVIASGVEEDAKKIGEEFHSLE
SRIVRGRVVRGEPRIDGRDPEMIRALSVATGVLPRAHGSALFTRGETQAMVVATLGTERD
AQNIDELTGNRADRFMLHYNFPPYCVGETGMMGSPKRREIGHGRLAKRGVAAVMPSADEF
PYVVRVVSEITESNGSSSMASVCGSSLALMDAGVPIKASVAGIAMGLVKEEEGFVVLSDI
LGDEDHLGDMDFKVAGTTEGVTALQMDIKIEGITKEIMEIALKQARGARLHILKVMDEAI
QAPRAEISDFAPRIHTIKINPEKIKDVIGKGGSVIRALTEETGTNIELDDDGTVRIAAVD
GDAAKEAIRRIEAITAEIEVNRIYEGKVVRLADFGAFVNILPGKDGLVHISQITDARVQN
VADYLKIGDVVKVKVLEVDRQGRVRLSIKEANAPTEAAAEPAVAAVEEPAAE
NT seq
2139 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcctattgtaaagtcattccagtacggtcaacacaccgtcactctggaaaccgga
gtgatggcccgtcaagccactgcggccgtcatggtcagcatggacgatacctgcgtattt
gtgaccgtagttggcaagaaagaggccgatcacggccgtgatttcttcccgctgaccgtc
aactaccaggagcgtacctatgctgctggtcgtatcccgggtggtttcttccgtcgtgaa
ggccgtccgagcgaaggcgagaccctgatctcccgtctgatcgaccgtcctattcgtccg
ctgttcccggaaggcttcctcaatgaggttcaggtggttgccaccgtcatgtccgtgaac
ccggccgtttctcccgacatcgttgccatgatcggtgcctccgcggcgctggccatctcc
ggtatcccgttcggcggcccgatcggtgcagcccgcgtgggttacatgaacggtcagtac
gtgctgaacccgaccactaccgaactgccgcagagcgatctggacctggtagtggccggt
accgccaacgccgtgctgatggttgaatccgaagcggctatcctctccgaagaggtgatg
ctgggtgccgtggtgttcggtcacgagcagatgcaggccgttatcaacgccatcaacgaa
ttcgctgccgacgtcggtaccaagccgtggaactggactgctcctgccgtcaacgaagcg
ctgaaagccaaggttgccgagctggcgacagctgagctgggtgaagcctaccgcatcacc
gagaaggccgtgcgttacgaaaccatcggcgccatcaaggctcgcgtggttgagcaagtc
atcgcttccggcgtggaagaagatgccaagaagatcggcgaagagttccacagcctggaa
agccgcatcgtccgtggtcgcgtcgtccgtggcgagccgcgcatcgatggtcgcgatccg
gagatgatccgcgccctgtccgtcgccaccggcgtactgccgcgtgcccacggctccgcc
ctgttcacccgtggtgagactcaggccatggtcgttgccaccctgggtaccgagcgtgac
gcccagaacatcgacgagctgaccggcaaccgcgccgatcgcttcatgctgcactacaac
ttcccgccatactgcgtcggtgagaccggcatgatgggtagcccgaagcgtcgtgaaatc
ggtcacggtcgtctggccaagcgcggcgttgctgccgtgatgccgagcgccgacgagttc
ccgtacgtggtacgcgtggtgtctgaaatcaccgaatccaacggctcctcctccatggcc
tccgtctgtggttcctccctggcactgatggacgccggtgtgccgatcaaggcctccgtt
gccggtatcgccatgggtctggtgaaggaagaagaaggtttcgtcgtgctgtccgacatc
ctgggtgacgaagatcacctcggcgacatggacttcaaggttgccggtaccaccgaaggt
gtgaccgcgctgcagatggacatcaagatcgaaggcatcaccaaagagatcatggagatt
gccctgaagcaagctcgtggtgctcgcctgcacatcctgaaagtgatggacgaagccatc
caggcaccgcgtgccgagatctccgatttcgccccgcgcatccacaccatcaagatcaac
ccggagaagatcaaggacgtcatcggtaaaggtggctccgtgatccgtgccctgaccgaa
gagaccggcaccaacatcgagctggatgatgacggtaccgtccgcatcgccgccgttgac
ggtgatgccgccaaggaagcgatccgccgtatcgaggccatcaccgccgagatcgaagtg
aaccgcatctacgaaggcaaggttgtacgtctggctgacttcggtgccttcgtcaacatc
ctgccgggcaaggacggtctggtgcacatctcccagatcaccgatgcacgcgtgcagaac
gtggccgactatctgaagatcggtgacgtggtgaaggtgaaggtactggaagtggaccgt
cagggccgcgtgcgtctctccatcaaggaagcgaacgccccgaccgaagccgcagccgag
ccggctgttgccgccgtcgaagagccggccgccgaataa
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