Aeromonas hydrophila MX16A: BOQ57_20625
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Entry
BOQ57_20625 CDS
T04629
Name
(GenBank) excinuclease ABC subunit A
KO
K03701
excinuclease ABC subunit A
Organism
aaj
Aeromonas hydrophila MX16A
Pathway
aaj03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BOQ57_20625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaj03400
]
BOQ57_20625
DNA repair and recombination proteins [BR:
aaj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BOQ57_20625
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
BOQ57_20625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
AAA_25
AAA_23
AAA_21
DnaJ_CXXCXGXG
Viral_helicase1
nSTAND3
NACHT
cobW
BCA_ABC_TP_C
T2SSE
ScfRs
Motif
Other DBs
NCBI-ProteinID:
APJ17125
LinkDB
All DBs
Position
complement(4418358..4421186)
Genome browser
AA seq
942 aa
AA seq
DB search
MEKIVVRGARTHNLKNINLTLPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIYDYLRLLFARVGEPRC
PTHAIPLAAQTISQMVDQVLAQPEGSKLMLLAPVVRDRKGEHTKLLENLAAQGYIRARID
GEVCDLSDPPALELHKKHTIEVVVDRFKVRDDLALRLAESFETALTLSGGIVLVVPMDGE
EGVAPMTFSANFACPECGYSMSELEPRIFSFNNPAGACPTCDGLGVQQYFDPAKVIGDPA
ISLANGAIRGWDKRSFYYFQMLKSLSEHYKFDLETPWEELPLKTQEVILRGSGRTEIEFR
YMNDRGDVVVRKHPFEGILHNMERRYRETESNSVREELSKYIANKSCTSCGGSRLREEAR
HVFVDNRNLPAIAEQSIGDALAFFEGLNLTGQRAQIAEKILKEIVERLGFLVNVGLNYLS
LSRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLKTLTHLRDLGN
TVIVVEHDEDAIRLADHVLDIGPGAGVHGGAIVAQGTPEEIIANPESLTGDYLSGRKQIA
IPAERTPLTGKWLKLKGASGNNLRNVNLDLPIGVMTCVTGVSGSGKSTLINDTLFRIAHR
ELNKATESTPAPYRSVEGLEHLDKVVDIDQSPIGRTPRSNPATYTGLFTPIRELLSGTQE
ARSRGYQPGRFSFNVKGGRCEACQGDGVIKVEMHFLPDVYVPCDVCKGKRYNRETLEVKY
KGKNIHEILEMTVEDAREFFDPVPAVARKLQTLMDVGLSYIRLGQSATTLSGGEAQRVKL
ARELSKRDTGQTLYILDEPTTGLHFHDIQQLLKVLHQLRDRGNTIVIIEHNLDVIKTADW
IVDLGPEGGAGGGRILVTGTPEEMSRCEDSHTARFLAPLLAR
NT seq
2829 nt
NT seq
+upstream
nt +downstream
nt
atggaaaagatcgtggtccggggtgctcgcacccacaacctcaagaacatcaatctgacc
ctgccccgcgacaagctgatcgtggtcaccggcctctccggttcgggcaaatcctctctg
gcgttcgataccctctatgccgaggggcagcgccgctatgtggagtcactctccgcctat
gcccgccagttcctctccctgatggagaagccggacgtcgaccatatcgaggggctctcg
cccgccatctccatcgagcagaagtccacttcccacaacccgcgctcgaccgttggcacc
atcaccgaaatctacgactacctgcgtctgttgttcgcccgggtcggtgagccgcgctgc
ccgacccacgccattccgctcgccgcccagaccatcagccagatggtggatcaggtgctg
gcccagcccgaggggagcaagctgatgctgctggccccggtggtgcgcgatcgcaagggg
gaacacaccaagctgctggagaatctggcggcccagggctacatccgtgcccgtatcgac
ggcgaggtgtgcgatctctccgacccgcccgcgctggagctgcacaagaagcacaccatc
gaggtggtggtggatcgcttcaaggtccgcgatgacctggccctgcgtctggccgagtcg
ttcgaaacggcgctgaccctttccggtggcatcgtactggtggtaccgatggatggtgag
gagggcgttgcccccatgaccttctccgccaacttcgcctgcccggagtgcggctactcc
atgtcagagctggagccgcgcatcttctccttcaacaacccggccggtgcttgcccgact
tgtgacggtctcggcgtgcagcaatatttcgacccggccaaggtgatcggcgatccggcc
atcagtctggccaacggcgccatccgtggctgggacaagcgcagcttctactacttccag
atgctcaaatccctctccgagcactacaagttcgatctggagacgccgtgggaggagcta
ccactcaagacccaggaggtgatcctgcgcggctccggtcgcaccgagatcgagttccgt
tacatgaacgatcgcggcgacgtggtggtgcgcaagcacccgttcgaggggatcctgcac
aacatggagcggcgctaccgggagaccgaatccaactcggtgcgcgaagagctctccaaa
tacatcgccaacaaatcctgtaccagctgcggtggcagccgactgcgggaagaggcgcgc
cacgtcttcgtcgacaaccgcaacctgccggccatcgccgagcagtccatcggcgatgcg
ctggccttcttcgaggggttgaacctcaccggccagcgcgcccagattgccgagaagatc
ttgaaagagatcgtcgaacggctcggtttcctggtgaacgtcggtctcaactatctgagc
ctgtcgcgcagcgccgagacactctccggtggcgaggcccagcgcattcgactggcgagc
cagatcggtgcgggcttggtgggagtcatgtatgtgctggacgaaccctccatcggcctg
caccaacgcgacaacgagcggctgctcaagaccctcactcacctgcgcgatctcggcaat
accgtgatcgtggtggagcacgacgaggatgccatccgcctcgccgaccatgtgctcgac
atcggcccaggagccggcgtgcacggcggtgccatcgtcgcccagggcacgccggaggag
atcattgcgaatcccgagtcgctgaccggtgactatctctccggccgcaagcagatcgcc
attcccgccgagcgcaccccgctcaccggcaagtggctgaaactcaagggggcgagcggc
aacaacctgcgcaacgtcaacctggatctgccgatcggggtgatgacctgcgttaccggc
gtctccggctccggcaagtcgaccctgatcaacgataccctgttccgcatcgcccaccgc
gagctcaacaaggcgaccgaatccacgccggcgccctatcgcagcgtggaagggctggag
catctggacaaggtggtggatatcgaccagagccccatcggccgcaccccgcgatccaac
ccggccacctacaccggcctgtttaccccgatccgcgagctgctctccggcacccaggag
gcacgctcgcgcggttaccagccgggccgcttctccttcaacgtgaaaggggggcgctgc
gaggcgtgtcagggggatggggtcatcaaggtggagatgcacttcctgccggatgtctac
gtgccgtgcgacgtctgcaagggcaagcgctataaccgcgagaccctggaggtgaagtac
aagggcaagaacatccacgaaatcctcgagatgacggtggaagatgcccgcgagttcttc
gaccctgtgccagcagtggcgcgcaagctgcagaccttgatggatgtgggcctctcctat
atccgcctcggccagtcggccactactttgtctggcggtgaggcgcagcgggtcaagctg
gcgcgggagctctccaagcgggataccggtcagaccctctatattctggacgagccgacc
accgggctgcacttccacgacatccagcagctgctcaaggtgctgcaccagttgcgggat
cgcggtaacaccatcgtcatcatcgagcacaacctggacgtcatcaaaaccgccgactgg
atcgtcgatctggggccggaggggggcgctggtggtggccgcattctggtgacggggacg
ccggaggagatgagccgttgcgaggattcccatacggcccgcttcctggcgccgctgctg
gcacgataa
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