Aeromonas hydrophila MX16A: BOQ57_20730
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Entry
BOQ57_20730 CDS
T04629
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
aaj
Aeromonas hydrophila MX16A
Pathway
aaj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aaj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BOQ57_20730
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aaj03400
]
BOQ57_20730
Enzymes [BR:
aaj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
BOQ57_20730
DNA repair and recombination proteins [BR:
aaj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BOQ57_20730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Biotin_carb_C
AAA_11
Motif
Other DBs
NCBI-ProteinID:
APJ17145
LinkDB
All DBs
Position
complement(4441011..4444628)
Genome browser
AA seq
1205 aa
AA seq
DB search
MANPLNTLRFPLYGERLIEASAGTGKTYTIAGLYLRLLLGHGPLIEEGEDAGQPSAHERP
LSVTEILVVTFTEAATAELRGRIRARIHEARLAFMRGKVVDEDKDPLLAELLKEVADHEL
AARRLLAAERQMDEAAVFTIHGFCQRMLKQNAFESGALFETEFLTDDSQLRLQAVSDYWR
SEFYPVDKPLASAVRALWPSPAALLREMGSWLDNSELEMRPPAGDETLAARHSVAMARIE
AVKREWLAQGDEIRRQTDGQVSRYTGKNYEGWLAKIADWAQDEHSGYAIPKELERFGQTV
LEENLKKGGAVPTLPLFSQIDELLASRPGIRDLILQRAAVVVRSRMQASKRQAHQLSFDD
LLKDLDGALGSGLGERLCERIRATYRVAMIDEFQDTDPQQYRIFHRLYGGHTDTALLMIG
DPKQAIYGFRGADIFTYIQARRNVSAHYTLGRNWRSSRALVAAVNGLFERAKDPFIYEAD
IPFLPVEAQGKSKALQLDGEAAPVLHCWQLSGQPTFNKGDYQSRMARSTAVEIHRLLTLA
RTGKAQIGDQPVKAGDIAVLVRTGAEGKLVQQELARLAIASVYLSNRESVLAQVEAREIL
LILHACQNPGEERSLRAALATGLFDLDAKALDELASDERAWESAVQEFMEYRKIWHKRGV
LAMLRSLLHRRNLASSLLASPNGERRLTNFLHLGELLQQVSCELDGEYALLRWLGEAASC
PDGQDAEQVLRLESERKLVQIVTIHKSKGLEYPLVFLPFICSHRAADTPLFHEADGAGNR
TVLDLTGAEESLAEADRERLAEDLRLLYVALTRGVYATWLGLAPVRSGNGKSEQTDLHQT
AIGYLLQKGEEGDATTLATALTELAQALPGVAVGEPSLTRPAPMAAEEEQLGEPQVRHFT
GTLERDWWISSYSGLAAQGHGHSKGVLANPGFDDEVVTEAAALASEQPEEAPQPSIFTFP
KGARPGTLLHSLFETIDFQSAGGEPLAEHIATLLAQDGFDESWAPVLQQQVEAVLNTPLE
TGFGEPVRLRDLAPERKQVELEFFLPMGRVTAPALTALCQQHDPLSRGNKPLSFATVQGM
LKGFIDLVFEWQGRWYLLDYKSNHLGMSPADYSRSALEQAMAEHRYDLQYQLYSLALHRL
LALRLPGYDFEQHFGGVFYLFLRGMPQGGIFHTRPSRELVQGLDRLFSEGAAPALAGVSD
NGVEA
NT seq
3618 nt
NT seq
+upstream
nt +downstream
nt
atggccaacccgctcaataccctgcgttttcccctctatggcgagcggctgatcgaggcc
tctgccggcaccggcaagacctacaccatcgccggtctctacctgcgcctgctgctgggc
cacggcccgcttatcgaagagggggaagacgccggtcaacccagcgcccacgagcggccg
ctctcggtgaccgagatcctggtggtgacctttaccgaggcggctaccgccgagctgcgc
ggccggatccgcgcccgcatccatgaggcacggctcgcctttatgcgcggtaaggtcgtc
gatgaagacaaagacccattgttagctgagttgctgaaggaggtggcggatcacgaactg
gcggcccgccgcctgctggccgccgaacggcagatggacgaggcggcggtcttcaccatc
cacggcttctgccagcggatgctgaaacagaacgccttcgagtcgggcgctctctttgaa
accgaatttctcaccgacgacagccagcttcggctgcaggcggtgagcgactactggcga
tccgagttctatccggtcgacaagcccctcgccagcgcggtgcgtgcgctctggccgagc
cccgccgccctgctgcgggagatgggcagctggctcgacaacagcgagctggagatgcgc
ccgccggcgggggacgagaccctggcggcgcggcacagcgttgccatggcccgcattgag
gcggtgaagcgcgagtggctggcgcaaggggacgagatccgccgccagacggatgggcaa
gtaagccgctacaccggcaagaactacgaaggctggcttgccaagatagccgactgggcg
caggacgagcacagcggctacgccattcccaaggagctggagcgcttcggccagacggtg
ctggaggagaacctcaagaaggggggcgcggtgccgaccctgccgctgttcagccagatc
gatgaactgctggcgagccgtcccggcattcgggatctcatcctgcaacgggcggcggtg
gtggtgcgcagccggatgcaggccagcaagcggcaagcccatcagctctcgttcgatgac
ctgctcaaagacctcgacggcgcacttggctccggccttggcgagcggttgtgcgagcgg
attcgcgccacctatcgggtggcgatgatcgatgaatttcaggataccgacccccagcag
taccgcatcttccaccggctttacggtggccacacggacacggcgctcttgatgatcggt
gaccccaagcaggccatctacggctttcgcggcgccgacatctttacctacattcaggcg
cggcgaaatgtgagcgcccactacaccctcgggcgcaactggcgctccagccgcgcgctg
gtggcggcggtcaacggcctgttcgagcgggccaaggatccgtttatctacgaggcggat
atccccttcctgccggtggaggcgcagggcaagagcaaggcgctgcagctggatggcgaa
gccgcacccgtgctccactgctggcagctgagcggccaacccaccttcaacaagggggat
taccagagccggatggcccgctccacggcggtggagatccaccgcctgctgaccctggct
cgcacgggcaaggcgcagattggcgatcagccggtgaaggccggagatatcgccgtgctg
gtgcgcaccggtgccgagggcaagctggtgcagcaggagctggcacggctcgccatcgcc
tccgtctacctgtcgaatcgcgaaagcgtgctggcgcaggtagaagcgcgggagatcctg
ctcattctgcacgcctgccagaacccgggggaggagcgcagccttagggcggcgctcgcc
accgggctgttcgatctggatgccaaggcgctcgacgagctcgccagtgacgagcgggcg
tgggagagcgcggtgcaggagtttatggagtaccgcaagatctggcacaagcgcggcgtg
ctggccatgctgcgctccctgctgcaccgacgcaatctcgcctcctccctgctggcgagc
ccgaatggcgagcggcggctgaccaacttcctccacctcggcgagctgctgcaacaggtg
agctgcgagctggacggcgaatatgccctgctgcgctggctgggggaggcggcgagttgc
cccgacggtcaggatgcggagcaggtactgcgcctcgaatccgagcgcaagctggtgcag
atcgtcaccatccacaaatccaaggggctggagtatccgctggtgttcctgcccttcatc
tgcagccaccgcgctgccgataccccgctgttccacgaagcggatggggcgggcaatcgc
accgtgctcgatctgaccggcgccgaggaatccctggccgaggccgaccgggagcggctt
gccgaagacctgcggctgctctatgtggcgctgacccggggcgtttacgccacctggctg
gggctggcgccggtgcgctccggcaatggcaagtcggagcagaccgacctgcaccagacc
gccatcggctacctgctgcaaaagggtgaggagggggatgccaccaccctggcgactgcc
ctgaccgagctggcgcaggcgctgcccggggtggctgtcggtgagccctcgctcacccgc
ccggcccccatggcggcggaggaggagcaactgggtgagccgcaggtgcgccactttacc
ggcacccttgagcgggattggtggatcagctcctactccgggttggcggcgcagggccac
ggccacagcaagggggtcttggccaatcccggcttcgatgacgaggtggtgaccgaggcg
gctgcattggcttccgagcaaccggaagaggcgccccaaccttccatcttcaccttcccg
aaaggggcgcgccccggcaccttgctgcacagcctgttcgagaccatcgactttcagagc
gccggcggcgagccgctggcggagcacatcgccaccctgctggcgcaggacggcttcgac
gaaagctgggcgcccgtgctgcaacagcaggtggaggcggtgctcaataccccgctggaa
acgggctttggcgagccggtgcggctgcgggatctggcccccgagcgcaagcaggtggag
ctggagttcttcctgcccatggggcgggtgacggcaccagcgctgaccgcgctctgccag
cagcacgacccgctgtcacgcggcaacaagccgctcagctttgccaccgtgcaggggatg
ctcaagggctttattgacctggtgttcgagtggcaggggcgctggtatctgctcgactac
aaatccaaccacctcggcatgagcccggccgattacagccgttcggcgctggagcaggca
atggccgagcaccgctacgacctgcaataccagctctactcgctggccctgcaccggctg
ctggccctgcgcctgccgggctacgacttcgagcagcactttggcggggtcttctatctg
ttcctgcgcggcatgccgcagggtgggattttccatacccgccccagccgtgagctggtg
caggggctggatcggttgtttagcgagggggcagcgcccgccctcgccggggtatcggat
aacggggtagaagcatga
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