Aminobacter aminovorans: AA2016_0248
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Entry
AA2016_0248 CDS
T04343
Name
(GenBank) Integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aak03032
]
AA2016_0248
03036 Chromosome and associated proteins [BR:
aak03036
]
AA2016_0248
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_0248
DNA replication proteins [BR:
aak03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AA2016_0248
Chromosome and associated proteins [BR:
aak03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AA2016_0248
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AA2016_0248
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
AMS39189
UniProt:
A0A142LYL9
LinkDB
All DBs
Position
248078..248362
Genome browser
AA seq
94 aa
AA seq
DB search
MIKSELVQIIATRNPHLFLRDVENIVSAIFDEITDALADGNRVELRGFGAFSVKNRPART
GRNPRTGESVEVEEKWVPFFKTGKELRERLNSAK
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagtctgaactggtgcaaatcattgccacacgcaatccgcatctgttcttgcgg
gatgtcgagaacatcgtcagcgccattttcgacgaaatcaccgatgcccttgccgacgga
aaccgcgtcgagttgcgcggattcggcgctttttcggtcaagaaccgccctgcccgcacc
ggccgcaacccgcgcaccggcgaatccgtcgaggtcgaggaaaagtgggtgcctttcttc
aagaccggcaaggagctgcgcgagcggctgaactcggccaaatag
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