Aminobacter aminovorans: AA2016_0929
Help
Entry
AA2016_0929 CDS
T04343
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aak03016
]
AA2016_0929
Enzymes [BR:
aak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
AA2016_0929
Transfer RNA biogenesis [BR:
aak03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
AA2016_0929
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
AMS39867
UniProt:
A0AAC8YK50
LinkDB
All DBs
Position
complement(976623..977219)
Genome browser
AA seq
198 aa
AA seq
DB search
MPRLFTALEIPRDAALSLSLLRGGLSGARWIDVENYHLTLRFFGDIEGHVADEIVEALDR
VDRPSFQLTLSGVGAFGQKKPHAVWAGVTPSPEMNALQAEIERISKRLGLPSDPRKFTPH
VTLARLRNTSPLDVAHYLSARGNFATVPFRVGRFVLMSSRDSVGGGPYIVEEAWPLNGVD
ARAASRSASASEASRIMR
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgccgcgacttttcaccgccctcgaaattccgcgtgatgccgccttatcgctgtcgctg
ctcaggggcggcctgtcaggcgcccgctggatcgatgtcgaaaactaccacctcaccttg
cgtttcttcggcgacatcgaaggccacgtcgccgacgagatcgtcgaagcactcgaccgt
gtcgaccgtccgagcttccagctcacgctttcgggtgtcggcgccttcgggcagaaaaag
ccgcacgcggtctgggccggcgtcacaccctcgccggagatgaacgcgctgcaggccgaa
atcgagcgcatcagcaagcgcctcggcctgccgtcggatccgcgcaagttcaccccgcat
gtcacgctggcgcggctcaggaacaccagcccgctcgatgtcgcacactatctgtcagcg
cgcggcaacttcgccaccgtgcccttccgtgtcggccgcttcgtcttgatgtcgtcgcgc
gactcggtcggcggcggcccctacatcgtcgaggaagcctggccgctgaatggcgtcgac
gcccgcgctgccagccggtcggcaagcgcctccgaagcgtcgcggatcatgcggtag
DBGET
integrated database retrieval system
