Aminobacter aminovorans: AA2016_1063
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Entry
AA2016_1063 CDS
T04343
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aak03032
]
AA2016_1063
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_1063
Enzymes [BR:
aak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AA2016_1063
DNA replication proteins [BR:
aak03032
]
Prokaryotic type
DNA Topoisomerases
AA2016_1063
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AA2016_1063
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
AMS40001
UniProt:
A0AAC8YL29
LinkDB
All DBs
Position
1103287..1104369
Genome browser
AA seq
360 aa
AA seq
DB search
MRKDTEQSRRVPDENAEAAHDASLAYVSDDEPGISRKRAGKRLLYETANGGKVASKAVLA
RIDALAIPPAWTDVWICAESNGHIQATGRDQRGRKQYRYHPDWSEKRDELKFSSLAEFAR
ALPLLRRRIDKDLRLRGMVRERVVAAVVWLLDNTMIRVGGAAYARENGSFGLTTLRNRHV
DIEGSTLRFAFKGKSGKEWRLRLVDRRMAKIVRSIQELPGQTLFQYLDDNGARAPISSQD
VNDYIRAAAGAAFSSKHFRTWGGTVRAMALFSRTPVPERAEARAQACNEVIDDVARHLGN
TRAVCRKGYIHPEVILAWSEGRLSDELAASRPKAGSQLDVDERITLAWLSRQEKRSRLQR
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgcggaaagacaccgagcagtcccggcgcgtgccggacgaaaatgccgaggccgcgcat
gacgcatcgctggcttatgtcagcgacgacgagcccggcatatcaaggaaaagggcaggc
aagcgccttctctacgaaacggccaatggcggaaaggtcgccagcaaggcggttcttgcg
cgcatcgatgcgcttgccattcctccggcatggactgatgtgtggatttgcgccgaaagc
aacggtcatatccaggcgacgggacgcgaccagcgtggccgaaagcaatatcgctaccat
cccgactggtcggaaaagcgtgacgagctcaaattctcgagcctggccgaatttgcacgc
gcgctgccgctgctgcgccgccggatcgacaaggatttgcggctgcgcggaatggtgcgc
gagcgggtcgtcgcagcggtggtatggctgctggacaatacaatgatccgggtgggtggc
gccgcctatgccagggagaatggcagcttcgggctgacgacgctacgcaaccgccatgtc
gacatcgaaggttcgacgctcagattcgccttcaagggcaaatcgggaaaagaatggcgt
ttgcggctggtcgacaggcgtatggcaaagatcgtgcgcagcatccaggaactgcccggc
cagaccctgtttcaatatctcgacgacaatggtgcgcgggcgccgatatcgtcccaggac
gtcaatgactacattcgagctgcggcgggcgcagctttcagctccaaacatttccgcacc
tggggcggaaccgtgcgcgcgatggcgctgttttccagaacgccggtgcccgagcgggcg
gaagcgagggcgcaggcatgcaacgaagtcattgacgacgttgccaggcacctcggtaac
acgcgggccgtctgccgaaaaggttacattcatccggaagtgattttggcgtggtcggaa
gggcggttgtctgacgagctggctgcgtcccgccccaaggccggctcgcagcttgacgtc
gacgagcgcatcactcttgcctggctttcgcggcaagagaagcgaagccgactgcagagg
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