Aminobacter aminovorans: AA2016_1204
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Entry
AA2016_1204 CDS
T04343
Name
(GenBank) Putative DNA/RNA helicase, superfamily I
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aak
Aminobacter aminovorans
Pathway
aak03420
Nucleotide excision repair
aak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA2016_1204
03430 Mismatch repair
AA2016_1204
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_1204
Enzymes [BR:
aak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AA2016_1204
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA2016_1204
MMR (mismatch excision repair)
Other MMR factors
AA2016_1204
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Herpes_ori_bp
ResIII
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AMS40139
UniProt:
A0AAC9AQB6
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All DBs
Position
1253522..1255630
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AA seq
702 aa
AA seq
DB search
MGGGAQSGGGGSTGVGTTAPYGGLDGTQLSFVRAPERDIRLLAPAGSGKTLSLLHRCVEL
SRRAPDSTFLIVSFTRAARDELKARLTGEDFSGFASRADAVTLNGWGHRRLRAMSISPRL
HVSEFERANMIKTVLAPAWSAVPALEKGMKHQPFKLPKLLAGLLDTMKTLGFDHEDGSLR
MAGDRLDVLTELGLMPLIQEYIERLEELGVLPNRRQESFLQVALPFFNNACAQQFATGSF
TLEDQKYGAWLDQRRQLAAGTVMAKEARITEILVDEFQDINPLDLALIMSIAELNQSALT
IVGDDDQAIFEWRGAAPDFILEPDRHLGRRFATYILEKNYRGPRNIVEKSARLIAHNKRR
VAKAMYPVSTTDAVVDMHRGATFLDSTENVLSEIHAFVGTKAPGARMALLSRKRAQLIPY
QILLARDDIPFCAAEDLHLFLSETFDRLLSALRTRTMAGLGVAVPTIVDDVMALCNSVQR
YPLRRAEADAMARHIRQARPKSYDAAIDQLETYDGPIRGQSDEGATAANFAIKLRQLIHA
PTVRAAIQALQNLYSGFRQDYGRGAEDIFLADPPFLYLVEFSERYGTDFQAFVDDLEKAK
DTLVKLPGMDGDSDSEVWKKPVHLMTALRAKGREFDTVVMLDVVDGIWPLRFANDERKLE
GERRLFYVAMTRARKRLILTVSGRIGDKVTIPSPFLAEAALP
NT seq
2109 nt
NT seq
+upstream
nt +downstream
nt
atggggggcggagcccaaagcggcgggggcgggtcgaccggggtgggcaccaccgcaccg
tatggtggcctagacgggacgcagctctctttcgtgagggcgccggagcgtgacattcgc
ctgctggcaccggcgggcagcggcaaaactctttcgctgctgcatcggtgcgtagagctt
agtcgccgtgcaccggactcaacgttccttatcgtatctttcacgcgcgcggcccgcgat
gagctgaaggcaaggctgaccggcgaagacttttccggttttgcctctcgggctgacgct
gtgacgcttaacggttggggccacaggcggctgagggcaatgtcgatatcgccgcgcctg
catgtctccgagttcgaacgagccaacatgatcaagacggtcctggcgccagcctggtct
gccgtgccggcgctagagaagggtatgaagcaccagccctttaagctgccaaagctgttg
gccgggctgctagacacaatgaaaactctcggcttcgaccatgaagatgggtcgttgcgg
atggcaggtgaccggctggatgtgctgaccgaacttggcctgatgcctttgatccaagag
tacatcgagcgactggaggaactgggcgtgctgccaaacagacgtcaggagtctttcctg
caagtggcgctaccatttttcaacaacgcttgcgcgcagcagttcgccactggatcgttc
acgctcgaggatcagaagtatggcgcctggctcgaccagcgacgccagctcgctgccggg
accgtgatggcgaaagaggctcgcatcaccgagatcttggttgacgagtttcaggacatc
aatcctctcgacctcgcgctgattatgagcattgccgagttgaaccagtcagcactgacg
atcgtcggtgacgacgaccaggcgatcttcgaatggcgtggcgcggcgcccgacttcatt
ctggagccggaccgccatcttggccggcgcttcgccacctatatcctggagaagaactac
cgcggcccgcgcaacatcgtggagaaatcggcaaggctgatcgcccacaacaaaaggcgc
gttgccaaggctatgtacccggtgtcgaccaccgacgccgtggtggacatgcacaggggc
gcgacgttccttgattccaccgagaacgtgctttcggagatccacgctttcgtcggcacc
aaggcgcccggcgcgcgcatggcgcttctgtcgcgcaagcgggcgcagctaattccttac
cagatcctgctggcgcgcgacgacattcccttctgtgcagcggaagacctgcacctgttc
ctctccgagaccttcgaccggttgcttagtgcgctgagaacgcgaaccatggccgggctg
ggtgtggccgtgccgacgatcgtcgacgacgtgatggcgctctgcaattccgtacagcgc
tatcccctgcgccgcgccgaggctgacgcgatggcgcggcatatccggcaggcgcgtcct
aaatcctatgacgcggcaatcgatcagctggagacctatgacggcccgatccgtgggcag
agcgacgagggtgcgacggcggccaactttgccatcaagctgcgccagctgatccatgcg
ccgaccgtgcgcgctgcaatccaagccctgcagaacctctattcaggcttccggcaggat
tacgggcgcggcgccgaggacatcttcctcgccgatccgccgttcctctatctcgtcgag
ttctccgagcgctatggcacagatttccaggccttcgtcgacgatctggaaaaggccaag
gacactctagtgaagttgcctggcatggatggtgatagcgacagcgaggtttggaagaag
ccggtgcacctgatgacggcgctgcgagccaagggtcgtgagttcgacaccgtcgtcatg
ctcgacgtcgtcgacggcatctggccgctgcgctttgccaatgatgagcgaaagctcgaa
ggtgaaaggcggctgttctacgttgcgatgacgcgagcgcgcaaacggctgatcctgact
gtctctgggcgcattggcgacaaggtgactataccatcgcctttcctcgcggaggccgcg
cttccctag
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