Aminobacter aminovorans: AA2016_2482
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Entry
AA2016_2482 CDS
T04343
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
aak
Aminobacter aminovorans
Pathway
aak03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
AA2016_2482
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_2482
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AA2016_2482
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AA2016_2482
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
AAA_22
Kinesin
Microtub_bd
SWI2_SNF2
DUF87
Motif
Other DBs
NCBI-ProteinID:
AMS41408
UniProt:
A0AAC8YNH0
LinkDB
All DBs
Position
complement(2527494..2530547)
Genome browser
AA seq
1017 aa
AA seq
DB search
MAKSPDKKSPALGSDNRAAQRKRGGNGVTDFLDASEPLHRPGFGEAPQAAFSGAPLSGSI
SDWAEEIAREAEKPQPKAKKIPEKSSAPTRSARGTSMGGAASAKERAAAGLNPVAGLDIS
LEDAASLSNSGVTATVAALSALIESGNPLHKNGEIWVPHRPARPEKSEGGIQIVMQSEFE
PAGDQPTAIKDLVEGVGNADRTQVLLGVTGSGKTFTMAKVIEQTQRPALILAPNKTLAAQ
LYAEFKKFFPDNAVEYFVSYYDYYQPEAYVPRTDTYIEKESTINEQIDRMRHSATRSLLE
RDDVIIVASVSCIYGIGSVETYTAMTFQMQVGDRLDQRQLLADLVAQQYKRQDINFVRGS
FRVRGDTIEIFPAHLEDSAWRISLFGDEIDAITEFDPLTGQKTGDLKSVKIYANSHYVTP
RPTLNQAIKSIKEELQHRLQELEKAGRLLEAQRLEQRTRFDLEMLEATGSCAGIENYSRY
LTGRRPGDPPPTLFEYIPDNALVFIDESHVTVPQIGGMYRGDFRRKATLAEYGFRLPSCM
DNRPLRFEEWDAMRPLSVAVSATPGSWEMEEAGGVFAEQVIRPTGLIDPPVEVRPAKNQV
DDVVGEIRATTQAGYRTLVTVLTKRMAEDLTEYLHENGVRVRYMHSDIDTLERIEILRDL
RLGAFDVLVGINLLREGLDIPECGFVAILDADKEGFLRSETSLIQTIGRAARNVDGKVIL
YADQITGSMERAMAETTRRREKQMVWNEANGITPESVKSRISDILDSVYEKDHVRADISQ
FTDGAGAMMGNNLKAHLEALDKQMRNAATDLDFEKAARIRDEIKRLRDMELAISDDPLAR
EVEGQSPASGREKGKHNKGVAKHRTVEEQERFRKLDEARAAEEAAKAARPNLFRKPKLDE
MGADGTVPAGKSLFAKPHIDDMGPGTDMTTPAGAVSRSLFKKQSAAEAHGSDYGVPDDGK
SLFRKNDLDEMTVRRTEKPVEGVKPIKRAKIGAGSYEDPAEAARAKKKPGKSGRPGQ
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atggccaaatctcctgacaagaaatcgcccgctctgggaagcgacaaccgtgccgcacag
cgcaagcgcggcggcaatggcgtaaccgacttcctcgacgcttccgagccgttgcatcgc
cccggtttcggcgaagcgccgcaggccgcgttctcgggcgcaccgctgtccggttcgatt
tcggattgggccgaagagattgcccgcgaggctgagaagccccagcccaaggccaagaaa
atcccggagaagagctcggccccgacccgttcggcgcgtggcacctcgatgggcggtgct
gcctccgccaaggagcgtgccgccgccggtctcaaccctgtcgccggcctcgacatttcg
ttggaggacgcggcgtcgctgtccaactccggcgtcaccgccaccgtcgcggcgctctcg
gccctgatcgagagcggcaacccgctgcacaagaacggcgagatctgggttccccaccgc
cccgctcgaccggaaaaatccgaaggtggcatccagatcgtcatgcagtcggaattcgag
ccggccggcgatcagcctactgccatcaaggacctcgtcgagggcgtcggcaatgccgac
cgcacccaggtgctgctcggcgtcaccggctccggcaagaccttcaccatggccaaggtg
atcgagcagacgcagcgcccggcgctgattctcgcgcccaacaagacgctggcagcccag
ctctatgccgagttcaagaagttcttccccgacaacgcggtcgagtatttcgtctcctat
tacgactactaccagcccgaggcctacgtcccgcgcaccgacacctatatcgagaaggaa
tcgaccatcaacgagcagatcgaccgcatgcgccattcggcgacgcgctcgctgctcgaa
cgcgacgacgtcatcatcgtcgcctcggtctcctgcatctacggtatcggctcggtcgag
acctacacggcaatgaccttccagatgcaggtcggcgaccgcctcgatcagcgccagttg
ctcgccgacctcgtcgcccagcaatacaagcgccaggacatcaatttcgtccgcggctcg
ttccgtgtccgcggcgacaccatcgagatcttccccgcccacctggaagactcggcatgg
cgcatctcgctgttcggtgacgaaatcgatgccatcaccgagttcgatccgctcaccggc
cagaagaccggcgacctcaagtcggtcaagatctacgccaattcgcactatgtgacgccg
cggcccaccttgaatcaggccatcaagtcgatcaaggaagagctgcagcatcgcctgcaa
gagcttgaaaaggctggccgcctgcttgaagcccagcgcctggaacagcgcacccgcttc
gacctggagatgctggaagcgactggctcctgcgccggcatcgaaaactattcacgctat
ctcaccggccgccgccccggcgatccgccgccgacgctgttcgagtacatccccgacaat
gcgctcgtcttcatcgacgaaagccacgtcaccgtgcctcagatcggcggcatgtaccgg
ggcgacttcaggcgaaaggcgacgctggccgaatacggcttccgcctgccctcctgcatg
gacaatcggccgctgcgtttcgaggaatgggacgccatgcgcccgctctcggtcgccgtg
tcggcgacgccggggagctgggagatggaagaggctggcggcgtctttgccgagcaggtc
atccgcccgaccggcctgatcgacccgccggtcgaggtgcgcccggccaagaatcaggtc
gacgacgtcgtcggcgagatccgtgccaccacccaggccggctaccgcacgctggtcact
gtgctgaccaagcgcatggccgaggacctgaccgaatacctgcacgagaacggcgtccgc
gtccgttacatgcactccgacatcgacacgctggagcgcatcgagattcttcgcgacctg
cgccttggcgcttttgacgtgctggtcggcatcaaccttttgcgcgaaggccttgatatt
cccgaatgcggtttcgtcgccattctcgatgccgacaaggagggtttcctccgctcggaa
acctcgctgatccagaccatcggccgcgcggctcgtaacgtcgacggcaaggtcatcctc
tacgccgaccagatcaccggctcgatggagcgcgcaatggccgagaccacgcgccgccgc
gaaaagcagatggtgtggaacgaagccaacggcattacgccggagagcgtcaagtcgcgc
atctccgacatcctcgactcggtctacgagaaggatcacgtccgcgccgacatctcgcag
ttcaccgacggtgccggtgccatgatgggcaacaatctgaaggcccatctcgaagcgctc
gacaagcagatgcgcaacgccgccaccgacctcgatttcgagaaggccgcccgcatccgc
gacgagatcaagcgcctgcgcgacatggagctcgccatttcggacgatccgctggcgcgc
gaggtcgagggccaaagccccgcttccggccgcgagaaaggcaagcacaacaagggcgtc
gccaagcaccgcacggtcgaggaacaggagcgtttccgcaagctggacgaggcccgcgcc
gccgaggaagcggccaaggctgcccgcccgaacctgttccgcaagccgaagctcgacgag
atgggcgccgacggtacggttcccgcaggcaagtcgctgtttgccaagcctcacatcgac
gacatgggaccaggcaccgacatgaccacgcccgccggcgcggtctcgcggtcgctgttc
aagaagcagtcggccgccgaagcccacggctccgattacggcgtccctgacgacggcaag
tcgctgttcaggaagaacgacctcgacgagatgaccgtccgccgcactgaaaagccggtc
gaaggcgtcaagccgatcaagcgcgccaagatcggcgccggctcctacgaggatccggcc
gaagccgcgcgtgcgaaaaagaagccgggcaaatcagggcggccagggcaatag
DBGET
integrated database retrieval system
