Aminobacter aminovorans: AA2016_3857
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Entry
AA2016_3857 CDS
T04343
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aak03032
]
AA2016_3857
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_3857
Enzymes [BR:
aak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AA2016_3857
DNA replication proteins [BR:
aak03032
]
Prokaryotic type
DNA Topoisomerases
AA2016_3857
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AA2016_3857
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
Zn_ribbon_Top1
Toprim_4
YhzD
Motif
Other DBs
NCBI-ProteinID:
AMS42776
UniProt:
A0AAC8YR92
LinkDB
All DBs
Position
3942003..3944615
Genome browser
AA seq
870 aa
AA seq
DB search
MDVVVVESPNKVKSINKYLGRNYKVLASFGHVRDLPAKDGSVKPEDDFAMSWSVDTASAK
RLSDIAKAVKEADGLILATDPDREGEAIAWHVLEVLKQKRVLKDKTIKRVAFNSITKQAV
LEAISNPREIDPPLVDAYLARRALDYLVGFTLSPVLWRKLPGARSAGRVQSVALRFVCDR
EAEIERFVREEYWQIAAILGTPRAENFEARLTAFDGKKLQKLDISSQAMADDIKAMLDGA
SFKTLSVEAKPTRRNPSAPFTTSTLQQAASSRLGFSASRTMQVAQRLYEGMEIGGETAGL
ITYMRTDGVQMAPEAIEAARNAIAKEFGTKYLPEKARQYTTKAKNAQEAHEAIRPTDFNR
TPAEMRKFLDADQARLYEMIWKRAIASQMQPAEIERTTVEIEARNGSRIAGLRAVGSVTR
FDGFIAAYTEQKDEDSEDEESRRLPEIRADETLKRESVDASHHTTEPPPRYSEASFIKKM
EELGIGRPSTYVATLKTLEDRDYVKIENRKLVPQAKGRLVTAFMESFFRHYVEYDFTASL
EEKLDEVSDGKLAWRDVLADFWKDFSGAVDEIKELRVTNVLDALNEELAPLVFPEREDGS
NPRICPKCGTGNLSLKLGKYGAFVGCSNYPECGFTRQLDGPGGNGDNGGLEDGTKVLGSD
PYTNEEITLRSGRFGPYIQRGDGKDAKRSSLPKGWAAASIDHEKALALLALPRDVGQHPE
TGKMISAGLGRYGPFVLHDGAYANLESIEDVFSIGLNRAVTVLAEKQAKGKGGRGGGTPA
ALKDLGEHPAGGGNVTVRDGKYGAYVNFGKVNATLPKNTDPATVTMETALALIAEKEAKG
GGAKKPARAAKKPAASTTKKAAASKAKKKD
NT seq
2613 nt
NT seq
+upstream
nt +downstream
nt
atggacgtcgttgtcgtcgagtcaccgaacaaggtgaaaagcatcaacaagtacctgggc
cggaactacaaggttctcgcctcgttcggccatgtccgcgatttgccggccaaggacggc
tcggtgaagccggaagacgattttgccatgtcctggtcggtcgacaccgcatcggccaag
cggctcagcgatatcgccaaggcggtcaaggaagccgatggcctgatcctcgcaaccgat
ccggatcgcgaaggtgaagccatcgcttggcacgtactcgaggtgctgaagcagaagcgc
gtgctgaaggacaagacgatcaagcgcgtcgccttcaactcgatcaccaagcaggcagtg
ctcgaagccatctccaatccgcgcgagatcgacccgccgctggtcgatgcctatctggcg
cgccgcgcgctcgactatcttgtcggcttcaccctgtcgcctgtgctgtggcgcaaactg
cccggcgcccgttcggctggccgcgtgcagtcggtggccttgcgcttcgtctgcgaccgc
gaagccgagatcgaacgtttcgtgcgtgaggaatattggcagatcgccgccatcctcggc
acgccgcgtgccgaaaactttgaagccaggctgaccgccttcgacggcaagaagctgcag
aagctcgacatctcgtcgcaggccatggccgatgacatcaaggcgatgctcgatggcgca
agcttcaagacgctgtcggtcgaggccaagccgacccggcgcaacccgagcgcgcccttc
accacctcgaccttgcagcaggctgcgtcgtctcgcctcggcttctcggcaagccgcacc
atgcaggtcgcccagcgcctctatgaaggcatggagatcggtggcgagaccgccggcctg
atcacctatatgcgtaccgacggcgtccagatggcgccggaggcgatcgaagccgcacgc
aatgccatcgccaaggaattcggcacaaagtacctgcccgaaaaggcgcgccagtacacc
accaaggccaagaacgcccaggaagcgcacgaagccattcggccgaccgacttcaatcgc
acgccggcagagatgcgcaaattcctcgatgccgaccaggcccggctctatgagatgatc
tggaagcgcgccattgccagccagatgcagccggccgagatcgagcgcaccacggtcgag
atcgaggcgcgcaacgggtcaagaatcgccggcctgcgcgccgtcggttcggtcacccgt
ttcgacggcttcatcgccgcttataccgagcagaaggacgaggattcggaagacgaggaa
agccgtcgcctgcccgagatccgcgccgacgaaacgctgaagcgcgagagcgtcgacgcc
agccatcacaccactgagccgccgccccgctactccgaagccagcttcatcaagaagatg
gaagagctcggcatcggccggccctcgacctatgtcgccacgctcaagacgcttgaggac
cgcgactatgtgaagatcgagaaccgcaagctcgtgccccaggccaagggccggctggtc
acggccttcatggagagtttcttccggcactatgtcgagtacgacttcaccgcctcgctc
gaggaaaagctcgatgaagtctcggacggcaagctcgcctggcgcgacgtgctggccgat
ttctggaaggacttctcgggtgcggtcgatgagatcaaggaactgcgcgtcaccaacgtg
ctcgacgcgctgaacgaggaactcgcgccactggtcttcccggaacgcgaggacggatcg
aacccgcgtatctgcccgaaatgcggcaccggcaacctgtcgctcaagctcggcaagtac
ggcgccttcgtcggctgctccaactatcccgaatgcggcttcacccgccagctcgacggc
cccggcggcaacggcgacaatggcggcctcgaagacggcaccaaggttctgggcagcgat
ccctacaccaatgaagagatcacgctgcgcagcggccgcttcggcccctacatccagcgc
ggtgacggcaaggacgccaagcgctccagcctgcccaagggctgggcggctgcgtccatc
gatcacgaaaaggcgctcgccttgctggcactgccacgcgatgtcggccagcacccagag
acgggcaagatgatctcggccgggcttggccgctacggcccgttcgtgctgcatgacggc
gcttatgccaatctcgaaagcatcgaggacgtgttctcgatcggcctcaaccgcgcggtc
acggtgcttgccgaaaagcaggccaagggcaagggcggacgcggcggcggtacgccggcg
gcgttgaaggatctcggcgaacaccccgccggaggcggcaacgtcaccgtgcgcgacggc
aagtacggcgcctatgtcaatttcggcaaggtcaatgctaccttgccgaagaacaccgat
ccggccaccgtgacgatggaaacggcactcgcgctgatcgccgaaaaagaggcgaaaggc
ggtggcgccaagaagcctgcccgagccgccaagaagccggcggccagcacaaccaaaaaa
gcggccgccagcaaggccaagaagaaggactag
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