Aminobacter aminovorans: AA2016_4074
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Entry
AA2016_4074 CDS
T04343
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
aak
Aminobacter aminovorans
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aak03016
]
AA2016_4074
Enzymes [BR:
aak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
AA2016_4074
Transfer RNA biogenesis [BR:
aak03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
AA2016_4074
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GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
AMS42991
UniProt:
A0AAC9ASH4
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All DBs
Position
4159493..4160650
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AA seq
385 aa
AA seq
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MHVITTQDELETVIAALEKSNFVTVDTEFIRETTFWPELCLIQMAAPGVSALVDPLAPDL
DLKPFFRLMANEAVTKVFHAARQDIEIIFHLGALIPHPVFDTQVAAMVCGFGDSVSYEQI
VQKITGGRIDKSSRFTDWRHRPLSEKQLDYALADVTHLIDVYKHLVTELERENRAHWLNE
EMEVLTSRETYDPHPEDAWKRLKMRLRKPQELAIVQAVAAWREREARERNVPRGRVLKDD
AIYEVAQQAPRDATALARLRTTPKGWERSSSATALLTVVNAALEIPRDQMPKLPKTFQPP
EGSSAASELLKVLLRLVSEKEGVAPKVLASGDDIDRIAAEGEAADVPALQGWRRSVFGDA
ALKLVRGELAIRFDKRRISVFEVNS
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcatgtaataacgacccaggacgaactcgaaaccgtcatagccgctctcgaaaagtcc
aacttcgtcacggtagacaccgagttcattcgcgaaaccactttctggcccgagctctgc
ctgatccagatggcagcgcccggcgtttccgcactggtcgatcccctggcgcccgacctc
gacctcaagccattcttccggctgatggccaatgaggcggtgaccaaggttttccatgcc
gcccgccaggacatcgaaatcatcttccatctcggcgcactgatcccgcacccggtgttc
gacacccaggtcgcggccatggtctgcggcttcggcgacagcgtctcctacgagcagatc
gtgcagaagatcaccggcggacgcatcgacaagtcatcgcgcttcaccgactggcgccac
cgcccgctgtcggaaaagcagctcgactacgcgctggccgacgtcacccacctgatcgac
gtctacaagcatctcgtcaccgagctcgagcgcgagaatcgcgcccactggctcaatgaa
gagatggaggtcctgacctcacgcgagacctacgacccgcatcccgaggacgcctggaag
cggcttaagatgcggctgcgcaagccgcaggaactggccatcgtgcaggcagtggctgcc
tggcgtgagcgcgaggcgcgcgagcgcaacgtgccgcgcggccgcgtgctcaaggacgac
gcgatctacgaagtcgcccagcaggcgccgcgcgatgcaaccgcacttgcccgactgcgc
accacgcccaagggctgggaacgttcgtcgtcggcgacggcgctgctcaccgtcgtcaac
gcggcgctcgaaattccgcgcgaccagatgcccaagctgcccaagacattccagccgccg
gagggctccagtgccgcctccgagctgctcaaggtcctgctgcggctcgtctcggagaag
gaaggcgttgcccccaaggtgctcgcttcgggcgacgatatcgaccgtatcgccgcagaa
ggcgaagctgccgacgtccctgccctgcagggctggcgccgttcggtgttcggcgatgca
gcactgaagctggtgcgcggtgaactggccatccgcttcgacaagcgccggatctcggtg
ttcgaggtcaacagctga
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