Aminobacter aminovorans: AA2016_5503
Help
Entry
AA2016_5503 CDS
T04343
Name
(GenBank) 5-hydroxymethyluracil DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aak
Aminobacter aminovorans
Pathway
aak03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AA2016_5503
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aak03400
]
AA2016_5503
Enzymes [BR:
aak01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
AA2016_5503
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
AA2016_5503
DNA repair and recombination proteins [BR:
aak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AA2016_5503
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
AMS44408
UniProt:
A0AAC8YUB6
LinkDB
All DBs
Position
5621414..5622304
Genome browser
AA seq
296 aa
AA seq
DB search
MPELPEVETVRRGLQPVLEGARIERVETRRPNLRYPFPDRFGERLEGRKITSLGRRAKYL
IADVEDAPLLICHLGMSGSFRVETDEGSAAPSNFHHERSKSEAHDHVVFHVADPKGVSAR
VVFNDPRRFGFMLFAERNGTEHPMLQGLGVEPTGNTLDGELLAHLFEGKKTPLKAALLDQ
RLIAGLGNIYVSEALWRAGLSPTRAAGTIADNGKVAKERATLLATSVREVIADAIAAGGS
SLRDYVHTDGSLGYFQHSFSVYDREGEPCAHSGCAGHIERIVQSGRSTFYCRQCQR
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattgcccgaagtcgaaaccgtgcggcgcggactgcagccggtgctggaaggc
gcgcgcatcgagcgcgtcgagacccgccgccccaatctgcgctaccccttccccgacagg
ttcggcgaacgcctggaaggccgcaagatcacctcgctcggacggcgcgccaaatatctg
atcgccgatgtcgaggatgcgccgctgctgatctgccatctcggcatgtccggttcgttc
cgcgtcgaaaccgacgagggctctgccgccccaagcaatttccaccacgagcgctcgaag
tccgaggctcacgaccatgtcgtcttccacgtcgcggatccaaagggggtttcggcgcga
gtcgtcttcaacgaccccaggcggttcggcttcatgctgtttgccgagcgcaacggcacc
gagcatccgatgctgcagggacttggcgtcgagccgacgggcaatacgcttgacggtgaa
ctgctcgcccatctgttcgaaggcaagaagactccactgaaggcggccctgctcgaccag
cggctgattgccggactgggcaacatctatgtctccgaggcactttggcgcgccgggctg
tcgccgacgcgggccgcaggcacaatcgccgacaatggcaaggtggcgaaggagcgggct
acgcttctggcgacatcggtgcgggaagtcattgccgatgcgatcgccgccggcgggtcc
tcgctgcgcgactatgtccataccgacggctcgctcggctacttccagcactccttctcc
gtctatgaccgcgagggcgaaccttgtgcgcacagcggctgtgcgggccacatcgagcgc
atcgtgcagagcgggcgctcaaccttctattgccgccagtgccagcgctga
DBGET
integrated database retrieval system
