Alteromonas australica H 17: EP13_00990
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Entry
EP13_00990 CDS
T03220
Symbol
uvrD
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aal
Alteromonas australica H 17
Pathway
aal03420
Nucleotide excision repair
aal03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
EP13_00990 (uvrD)
03430 Mismatch repair
EP13_00990 (uvrD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aal03400
]
EP13_00990 (uvrD)
Enzymes [BR:
aal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP13_00990 (uvrD)
DNA repair and recombination proteins [BR:
aal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
EP13_00990 (uvrD)
MMR (mismatch excision repair)
Other MMR factors
EP13_00990 (uvrD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Motif
Other DBs
NCBI-ProteinID:
AIF97383
UniProt:
A0A075NVG9
LinkDB
All DBs
Position
complement(230159..232330)
Genome browser
AA seq
723 aa
AA seq
DB search
MDVSRLLDELNDKQREAVAAPLSNALVLAGAGSGKTRVLVHRIAWLMEVENITPFSILAV
TFTNKAAREMRGRIESLMGRSLHNMWIGTFHGLAHRLLRAHHAEAGLPENFQILDSDDQY
RLIKRILKAMNLDEKHWAPRQVQWYINGNKDEGLRPQHIETHGDHIQKKMREIYAAYQDA
CDRSGLVDFAELLLRAHELWAKNPDVLAHYQRRFRAVLVDEFQDTNNIQYAWLRMLCSGD
TNNIMIVGDDDQSIYGWRGANVDNIQHFLKDFDNPTTVRLEQNYRSTGNILKAANTVIDN
NTGRLGKELWTEDGQGELISVYAGFNELDEARFIVSKIKDWLHQGNALKDTAILYRNNAQ
SRVLEEALLHEGIAYRIYGGLRFFERQEIKDALGYLRMINHPHDDAAFERVVNTPSRGIG
EKTLSQVRETARAHNCSMWQASQLLINEKALKGRALNAMQSFALLISELEQATTEAPLEE
QADVAIRQSGLYAMYQAERGEKAQARLENLEELVTACKQFIVPEEAEEMTPLSAFLAHAS
LEAGEQQADKDQDAVQMMTIHTAKGLEFPLVFMAGVEEGMFPSQMTNDEPGRMEEERRLC
YVGMTRAMQKLYITYAESRRLYGQDKYHTASRFIKEIPADCVEEVRLRTTISRPVHNRFS
QATSHASFEDTGFQLGQRVVHRKFGEGIVLNYEGSGEHARVQVNFDEFGTKWLVLAYAKL
EQA
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggatgtatccagactgcttgacgagctcaacgacaaacaacgtgaagcggtagctgcg
cccttatcaaatgcccttgtactggcaggcgccggtagtggtaaaacccgtgttttggtg
catcgtatagcgtggttaatggaagtcgaaaacatcacgcccttctccatattagccgta
accttcaccaataaagcggccagagaaatgcgtggtcgtattgaatcgttaatgggtaga
agcttacacaacatgtggattggcacattccatggccttgcccaccggctgcttcgtgcc
caccacgcagaagcaggcttgccggaaaacttccagattcttgattctgacgatcaatat
cggcttattaaacgtattttaaaagccatgaatttagacgaaaaacactgggcgcctcgc
caagtgcaatggtacatcaacggcaataaagacgaaggtttacgtccgcaacatattgaa
acccatggcgatcacattcaaaagaagatgcgcgaaatatacgccgcatatcaagatgct
tgtgaccgctcaggccttgtcgactttgccgaattattattaagagcgcacgagctctgg
gccaagaacccagacgtattagcccactatcagcgccgttttcgtgcagtattggtagac
gaatttcaagataccaataacattcaatatgcatggcttcgcatgttgtgcagcggcgac
accaacaatattatgattgtgggggatgatgaccagtctatctatggctggcgtggtgct
aacgtagacaatattcagcatttccttaaagatttcgacaacccaaccacggttcgtctt
gagcaaaattaccgctccaccggcaatatcttaaaagcggctaacacagtcattgataac
aataccggccggttgggcaaagagctttggactgaagacggtcaaggcgagcttatctcg
gtatacgccggctttaatgaattagatgaagcgcgctttattgtctctaaaattaaagac
tggctacatcaaggcaatgcattaaaagataccgctattttataccgtaacaacgcccag
tcgcgggtactcgaagaagccctcttgcacgaaggcatcgcttaccgtatttatggggga
ttacgattcttcgaacgccaagaaattaaagacgcgcttggttatttacgtatgatcaac
cacccgcatgatgacgcggccttcgagcgtgttgtgaatacaccaagtcgtggtattggc
gaaaaaaccttgtcgcaagtgcgagaaacggctcgtgcgcacaactgctctatgtggcaa
gccagccaattgctgatcaatgaaaaagcgttaaaagggcgggcgttaaatgccatgcaa
agctttgcgctcttaataagcgagctagaacaggccaccactgaagcgcctctcgaagag
caagctgatgttgctatacgtcaatctggcttgtatgccatgtaccaagcagagcgaggc
gaaaaagcgcaagccagattagaaaacttagaagaattagtcacggcgtgtaagcagttt
attgtgcccgaagaagcggaagaaatgacgcccctttccgcctttctcgcccacgcgtca
cttgaagccggcgaacaacaagccgataaagatcaagacgcagtccaaatgatgacgata
catactgcaaagggcttagagtttcctcttgttttcatggccggtgtagaagaagggatg
tttcccagccaaatgaccaacgacgaacccggcagaatggaagaagagcgtcgcctctgt
tatgtgggcatgacacgggctatgcaaaagttatatattacctatgcagaaagtcgccgc
ttgtatggccaagataaatatcatacggcgtctcgctttattaaggaaatacctgcagac
tgtgtagaagaagttcgcttacgcaccactatttcgcggcccgttcacaatcgatttagc
caagcaacatcacatgcctcctttgaagataccgggtttcaactgggtcagcgagttgtg
cataggaagtttggcgaaggtattgtattaaattacgaaggcagcggcgagcacgcacgc
gtacaagtaaattttgatgaatttggtaccaaatggttggtgctagcatacgctaagttg
gagcaagcgtaa
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