Alteromonas australica H 17: EP13_08480
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Entry
EP13_08480 CDS
T03220
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aal
Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aal03032
]
EP13_08480
03400 DNA repair and recombination proteins [BR:
aal03400
]
EP13_08480
Enzymes [BR:
aal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
EP13_08480
DNA replication proteins [BR:
aal03032
]
Prokaryotic type
DNA Topoisomerases
EP13_08480
DNA repair and recombination proteins [BR:
aal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EP13_08480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_Ribbon_Topo
Zn_ribbon_bTOP1
Toprim
Zn_ribbon_Top1
Zn_ribbon_LysW
Zn_ribbon_recom
Gp-FAR-1
Zn_ribbon_TFIIB
Toprim_2
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
AIF98714
UniProt:
A0A075NVP5
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Position
1864387..1867047
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AA seq
886 aa
AA seq
DB search
MAKSLVIVESPAKAKTINKYLGKDFIVKSSVGHVRDLPTKALGKVEPKKPAKELKTLSDE
ERLEYLRRHEYLKLVDRMGVDPEKDWQAHYQVLQGKEKVVNELKKLAKDADTIYLATDLD
REGEAIAWHLQELLGSKGKTYQRVVFNEITKNAIQDAFSDPGELNISRVNAQQARRFLDR
VVGFMVSPLLWKKIARGLSAGRVQSVAVRLVVEREREIKAFVPEEFWDVHADLTSQQQAA
LRMLVAKHQGNAFKPKNKAETDKALAELDGANYQVESRESKPTQSRPSAPFITSTLQQAA
STRLGFGVKKTMMMAQRLYEAGYITYMRTDSTNLSQEALDSARAYISDNFGNKYLPDSPI
RYGSKEGAQEAHEAIRPSNVSIGAASLGDMERDAQRLYELIWRQFVACQMTPAKYDATTI
RVSAGDYELTAKGRVLKFDGWTRVQPQLRKKGDEELMLPDVQKGDVLELKALDPKQHFTK
PVARFNEASLVKELEKRGIGRPSTYASIISTIQDRGYVRLENKRFYAEKMGEIVNDRLME
NFDDLMSYDFTANMEQQLDDIAEGNKNWKDVLNDFYSGFYGKLLNAEKDPEEGGMRLNQA
VPAGIECDKCGREMNVRTASTGVFLGCSGYNLPPKERCTNTMNLTAGDEVVKVDDEEELE
TEALRSKKRCPKCGTAMDSYLVDESRKLHVCGNTPTCDGTLVESGTFKIKGYDGPIIECD
KCGSDMELKNGRFGKYFGCTNEECKNTRKLLRNGEAAPPKEDPVDLPELPCEKSDAHFML
RDGASGIFLAAHNFPKSRETRAPKVEELARFRDRISPKFYYLADAPQKDPEGNPAIVRYS
RKTKQQYVMSENEAGKATGWSAWYDDGKWQEQAAKKPAAKAKAKKK
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcactggtcatagtcgagtcaccagccaaagcaaaaacgataaataaatat
ctcggtaaagattttatcgtaaaaagttcggttggccacgtgcgagatcttccaacgaag
gcattaggcaaagttgagcctaaaaaaccggcaaaagaactcaaaactttaagcgatgaa
gagcgactagaatatcttcgtcgtcacgaatatttgaaacttgtcgatcgcatgggtgtt
gacccagaaaaagattggcaagcgcactatcaagtgttgcaaggcaaagaaaaagtggtt
aacgaactcaagaagttagccaaagacgctgatactatttatctcgcaacggatttggac
cgtgaaggggaggccatcgcgtggcacttgcaagagttgctaggaagcaaaggtaaaact
taccagcgcgtcgtgttcaacgaaattactaaaaacgcgattcaagatgcgttttctgat
ccgggcgaacttaatatttcccgggtgaatgcacagcaagcacgtcgattcctcgaccgt
gttgttggttttatggtgtcgccactgttatggaaaaaaattgctcgtggcctgtccgca
ggacgagttcaatcggtagctgtacgcttagttgttgagcgtgaacgtgaaattaaagcc
tttgtgcccgaagagttttgggatgtgcacgccgacttaaccagccaacaacaagccgca
ttgcgcatgttggtggcaaaacatcagggcaatgcgtttaagcccaaaaataaagccgaa
acagacaaagcgttggccgagttagatggcgcaaattaccaagttgaaagccgtgagtcg
aaaccgacacaaagccgaccttctgcgccctttataacttctacattacagcaagcggca
agcacacgcttagggtttggcgtgaagaaaaccatgatgatggcccagcgtttatatgaa
gcgggttacatcacctatatgcgtaccgactcaaccaatttgagccaagaagcccttgat
agtgcacgggcgtatatttccgataattttggtaacaagtatttacctgactcgcctatt
cgctatggcagtaaagaaggtgcgcaagaagcgcacgaagctatccgtccttctaacgtt
agcataggagctgccagcctaggcgatatggagcgtgatgctcagcgtctttacgaatta
atttggcgtcaatttgtggcctgccaaatgaccccagcgaaatacgatgcgaccaccatt
cgagtgtctgctggcgactatgaactaacagcgaagggccgcgtacttaagtttgatggt
tggacccgtgttcagcctcaattgcgtaagaaaggcgacgaagagctcatgttgccagac
gttcaaaaaggtgacgtactcgaattaaaagcgttagatcctaagcagcactttaccaag
cctgttgcgcgttttaatgaagcatcactggttaaagagctcgaaaaacgtggtattggt
cgcccatctacctatgcgagtattatttcaaccattcaagatcgcggctatgtgcgttta
gaaaacaaacgtttttatgccgagaaaatgggtgaaattgttaatgatcgtctcatggaa
aactttgacgatttaatgagttacgactttaccgcaaacatggaacagcaattagatgat
attgctgagggtaataaaaactggaaagacgtgctcaacgacttctacagtggtttttac
ggcaagttactgaacgctgagaaggaccctgaagaaggcggtatgcgtcttaatcaagcg
gttcctgcgggcattgaatgtgataaatgtggccgcgaaatgaacgtacgtaccgcctct
accggggttttccttggatgctctggttacaacttaccgccgaaagagcgctgtacaaac
accatgaaccttaccgctggtgatgaagtggtgaaggttgatgacgaagaagaacttgag
acagaagcgctacgctcgaaaaagcgttgtccaaaatgtggcaccgccatggacagctac
ctcgttgatgaatctcgtaaacttcacgtgtgcggtaataccccgacctgtgatggcacc
ttggtagagagtggcaccttcaagattaaaggctatgacggccctattatcgagtgcgat
aaatgtggtagcgacatggagcttaaaaacggccggtttggcaagtattttggctgtacc
aatgaagagtgtaaaaatactcgcaagctgttgcgaaatggtgaagctgcgccaccgaag
gaagatccagtggatttacctgagcttccttgcgagaaatcagatgcccactttatgtta
cgggacggggcgtcaggtatctttttagcggcgcataacttccctaagtcgcgagagaca
cgtgcgccgaaagtggaagagttggcgcgctttagggatagaatttcgccgaaattctat
tatcttgcagatgcgccacaaaaggatcctgaaggtaatccggccattgttcgttacagc
cgtaagactaaacagcagtatgtgatgtcggaaaatgaagctggaaaggctacaggctgg
tcggcgtggtatgacgacggcaaatggcaagagcaggctgcgaaaaagccagctgctaaa
gcgaaagcaaagaaaaaatag
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