Alteromonas australica H 17: EP13_08700
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Entry
EP13_08700 CDS
T03220
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
aal
Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aal03016
]
EP13_08700
Enzymes [BR:
aal01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
EP13_08700
Transfer RNA biogenesis [BR:
aal03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EP13_08700
Prokaryotic type
EP13_08700
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
Motif
Other DBs
NCBI-ProteinID:
AIF98753
UniProt:
A0A075NYX5
LinkDB
All DBs
Position
1916179..1917159
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AA seq
326 aa
AA seq
DB search
MARRRKGRSINGIVLLDKPLGGSSNQLLQKVRWLYKAQKAGHTGALDPLASGMLPLCLGE
ATKFSQFLLDAEKTYEVTAKLGVRTTTSDADGEVVEEKPVEVNEAQVNAACLAFLGKSKQ
IPSMFSALKHQGKPLYFYARQGIVIEREPRDIEVYELEVTRLALPYVDMRIKCSKGTYIR
SIVDDLGQNLGCGAYVTRLHRTEVADYPTDKMVSLDTLIETQEALSEGEFEALDAYLIPM
DTAVSRLPYILINDAERARFDNGQSVIGTSVTPLVQGKSYRVYHGEDTQGLFLGVGEAVL
DPKDQGVAKNALYVNPKRRVVYGDEG
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atggcgagaagacgcaaaggccgcagtattaatggcattgtacttttagataagccactc
ggtggttcatcaaatcaactattgcagaaagtacgatggttgtataaagcgcaaaaggct
gggcataccggggcactagatccattggcaagcggtatgcttccgctttgtttaggtgaa
gctacgaaattttctcagtttttgttagatgctgaaaaaacctatgaagtcactgctaag
ttaggggtaagaaccaccacctctgacgcagacggtgaggtggttgaagaaaagcccgtt
gaggtgaatgaggcgcaagtcaacgcggcgtgtttggcctttctcggtaagagtaagcaa
atcccgtctatgttttctgcgctaaagcatcaggggaagccgctgtatttctatgcacgt
caaggtattgttatcgagcgtgaacccagagatatagaagtgtatgagttagaggtcacg
cgccttgccttgccttatgtcgatatgcgtattaagtgtagtaaagggacttatatccgt
tccatcgttgacgacttagggcagaacttaggctgtggcgcctatgtcacccgattacat
cgtacagaagtggccgattatcctacggataaaatggtgtcattagacacactgatagag
acgcaagaagcgttatctgagggagagtttgaagcccttgatgcctatctaattcccatg
gatacggccgtgagtcggttgccatatatcctcattaacgatgctgaacgcgctcgattc
gataacggccaaagtgtcataggaacttccgttacccctcttgttcaagggaagtcttac
cgtgtttatcacggtgaagatacacaagggctttttttgggcgtgggggaggcggtatta
gaccctaaagaccaaggcgtggcgaaaaacgcgctgtacgtcaaccctaaacgacgcgtg
gtttatggcgacgaaggttag
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