Alteromonas australica H 17: EP13_11245
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Entry
EP13_11245 CDS
T03220
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aal
Alteromonas australica H 17
Pathway
aal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP13_11245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aal03400
]
EP13_11245
Enzymes [BR:
aal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
EP13_11245
DNA repair and recombination proteins [BR:
aal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP13_11245
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
AAA_11
Viral_helicase1
NAT10_TcmA_helicase
SH3_13
SLFN-g3_helicase
UvrD-helicase
AAA_22
UvrD_C
RecD_N
ResIII
DEAD
AAA_12
nSTAND3
PhoH
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
AIF99214
UniProt:
A0A075NX13
LinkDB
All DBs
Position
complement(2471885..2473870)
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AA seq
661 aa
AA seq
DB search
MTKNRRIATDIFNGLYGIEAIDKFIAIEFALTESLDEKENEIWLHLLVALSYMQRNGHSC
LPLNVLAGCTWFSDPGLSDVVEDTDTKTVDEVKVGYRFCALTPLIGVVKKALLAPNISSL
FVYSQGVFYSRRYFEFEQEVAGQLANRTRFVNLEEQALSQVKALWPAMFPTSMQAHQDWQ
QIAVAKSLVQHFSVINGGPGTGKTYTVLRLILALQAMDAGLNIVLAAPTGKAQQRMTESI
LSNIAGLRGKVDDTYLNRVPTTATTLHRLLGIREYTVATKYDQYNPLNLDVLIVDEASMV
DLALMTRIMRALPDHARLYFIGDADQLPAVELGNVLEQLVGHSAHDAPHANLDEAKLGAV
PTPLRQHIASLCPHLPLLPVDEDAKTWVHTLQAPQRFKGQIAKVATAIQKGEADAALANI
TPGVDELADSTTYVSVLQSGVTMRSEQDISKVQLQRMAKESYATVFAATTVDDALKRLNK
VRWLTPIRNGSMGVEGLNTLIYDAIKHNIVRREGSFYQGQPIMITKNNHPQRLSNGEVGI
IWPDSSGKLYAWFETQEGDLRHIALSRVPQYETVYAMTIHKSQGSEFDNVVLLLPKPESA
KSASLFHRGLVYTGLTRAKKGCLIIADSPTFKDMVINLDTRYSGLANAISEKTMGLSEVS
Q
NT seq
1986 nt
NT seq
+upstream
nt +downstream
nt
atgacaaagaatagacggattgccacggacattttcaatgggctatatggtattgaggcc
atagacaaatttattgcaatagaatttgccttaactgaaagcttagatgaaaaagaaaat
gaaatttggctgcatctgttagttgcgctttcttatatgcagcgcaatggacacagctgt
ttaccgttaaacgtattggcaggttgtacatggtttagtgatcccggtctttctgatgtt
gttgaagacaccgacacaaaaaccgtagacgaggtaaaagtgggttatcgtttttgcgcc
ctcacgcccttaattggtgtggtgaaaaaggcgttgttagcgcccaatatttcctcgctg
tttgtttattctcaaggcgtattttatagccgtcggtattttgaatttgaacaggaagtg
gcagggcaattagcgaatagaacgcgcttcgttaatctggaagagcaagcacttagccaa
gttaaagcattgtggccagcaatgttccctacgagtatgcaggcgcaccaagactggcaa
cagattgcagtagctaaaagcttagttcagcattttagtgtgataaatggagggcctggt
acgggtaaaacctatacggtgcttcgcttaatattagcattgcaagccatggatgcaggg
ctaaatattgtgctcgcagcgcctacaggtaaagcacaacagcggatgacagagtccatt
ctaagcaatattgctggtctacgtggcaaagtagacgatacttacttaaatcgtgtaccc
accacagcgaccaccttacaccgattgttgggcattcgagaatatacggtggcgacgaaa
tacgatcaatacaaccctttaaaccttgatgtattgattgttgatgaagccagtatggtt
gatttagccttgatgacaagaataatgcgggcccttcctgatcacgcgcgactctacttt
attggcgatgctgaccaattgcctgcggttgaactaggaaacgttttagagcaattagtg
gggcattcagcacacgatgcaccgcacgcgaatctagatgaggctaaacttggtgcggtg
cctacgccgctaaggcagcatattgcttccttatgtccacatctgcctttactcccggtg
gatgaagacgcaaaaacatgggtacacaccttacaagcgccacaacggtttaaagggcaa
atcgcaaaggttgcaacagccattcaaaaaggtgaggctgacgcggcgttagcaaatata
acccctggagtcgatgagttggctgattcgacaacctatgtatcagtattgcagtcgggc
gtgacaatgcgatcagagcaagatatcagtaaggtgcagttgcagcgcatggcgaaagaa
agttatgccaccgtgtttgccgccactaccgttgacgatgcactcaagcggttaaacaag
gtgcgctggttaacgcctatacgcaatggcagcatgggcgtagaggggttaaatacgctg
atatacgacgccattaaacataacattgtccgtcgggaaggaagcttttatcaagggcaa
cctattatgatcactaaaaataatcacccgcaacggttatctaatggcgaagtgggcatt
atctggccagattctagcggcaaactctacgcttggtttgaaacgcaagagggtgatttg
cggcatattgccctttcacgggtacctcaatatgaaaccgtatatgccatgacaattcat
aagtcacagggttctgagtttgacaatgttgtattgcttttgcctaagcctgaaagtgcc
aaatctgcgagtttgtttcaccggggattagtttacaccgggctcacccgtgccaaaaaa
gggtgtttaatcattgctgatagccccacatttaaagacatggtgataaacctagatacc
cgttattcaggccttgcaaatgctatcagtgagaagaccatgggcttatccgaggtttca
caataa
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