Alteromonas australica H 17: EP13_16980
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Entry
EP13_16980 CDS
T03220
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
aal
Alteromonas australica H 17
Pathway
aal03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
EP13_16980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aal03400
]
EP13_16980
Enzymes [BR:
aal01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
EP13_16980
DNA repair and recombination proteins [BR:
aal03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
EP13_16980
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
PriA-like_WH
AAA_30
ABATE
Motif
Other DBs
NCBI-ProteinID:
AIG00236
UniProt:
A0A075P5M7
LinkDB
All DBs
Position
complement(3811609..3813798)
Genome browser
AA seq
729 aa
AA seq
DB search
MVFIQVAVPVPIRQLFTYQHAVALPSGVRVAVPFGPRSLIGVVVAQQNEADVENINKIKP
IEKVIDDTPVIDGVLMKMAQWLWQYYHHAPGEVLHAMLPVLLRKGESAQPSKQAYLFATE
DGYMCEQAKLQRAPKQLACLDALKKSPMIATEARKAFSPTGVKALIEKGLVEMKEVMPSF
TPFDYVSHLKVSATPVPDKEQAVAIAALNQQHHRFVISLLEGVTGSGKTEVYLQAIAPLL
AAKQQVLILVPEIGLTPQTVARFEKRFSIAVGVLHSQLTDSARLLVWQRAKAGELGIIIG
TRSAIFTPFKALGMIIVDEEHDESFKQQDGLRYHARDLAAVRAKEENIPLLLGSATPALE
TLNNALSGRYTHLQLTQRAGGAQRTQQHLLDARDQPVHYGITEGMLTLMRQHVNAGNQIL
VFVNRRGYAPAMLCHHCGETVTCKRCDKPYTVHKSQNRLQCHHCAATRAIPRHCEVCHST
ELVTAGTGTEQVEKGLETLFPDAKQVRIDSDTIRGKDKLHTTLDAINNREYQLLVGTQIL
SKGHHFPHVTLVVVLDCDGALFSADFRAAEKLAQLVTQLAGRAGRASKPGEMWLQTHNPH
HPLLQDLVNNGYAHFARHALMERKAAGLPPYISQIVIRAEATDSALVFRFLQQCKHILMP
SGSTSPSVAGPFPCLMEKRQGRYRFMLVCSNEKRGPLHHGLRVALPYMQALPDAAKVRWS
VDIDPTDFS
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atggtatttattcaggtcgcggtacctgtacccattcgccaattgttcacctatcaacac
gcggttgcattgcctagtggtgttcgagtggctgttccctttgggccgcggtcgttaatt
ggcgtagtggtagcacagcaaaacgaggccgacgttgagaatatcaacaaaattaagccc
atcgagaaggtcatagacgacacgccggtgattgatggtgtactgatgaaaatggcgcag
tggctttggcaatattatcatcatgccccgggcgaagtactgcatgccatgctgcccgtg
ttgctgcgcaaaggcgaatcggcgcagccatccaaacaggcttacctctttgcaacagaa
gacgggtacatgtgtgaacaggcgaagttgcagcgggcaccaaaacaacttgcctgttta
gacgcgctgaaaaaatcacccatgatagccacagaagcgagaaaagcgttttcgcccact
ggggtaaaagccctaatcgaaaaagggttggtggaaatgaaagaggtaatgccttcgttt
acaccctttgattatgtatctcatttaaaggtaagcgcgacaccggtacctgacaaggaa
caagcggtagccattgctgcactaaaccaacaacatcatcgttttgtgattagtttgcta
gaaggtgtcacaggcagtggcaaaaccgaagtgtatttacaggctattgcgcccttattg
gccgcaaagcagcaagtgcttattttggtgcccgaaattgggctgacaccacaaacggtg
gcgcgttttgaaaaacgtttttccattgccgtgggggtacttcattctcaactcacagat
tcggcaaggttgttagtatggcagcgggcgaaagccggtgagctaggcattattattggc
acccgctctgctatttttacaccgtttaaagccttgggcatgattattgtcgacgaagag
catgatgagtcttttaaacagcaagatggattacggtatcacgcccgagatttagccgcc
gtcagggcgaaagaagaaaacattcccttactgctgggaagtgccacaccggcactggaa
accctcaataatgccctttctggccgttatactcacctgcaactcacccaacgcgcgggt
ggcgctcaacgtacgcaacaacatttactcgatgcccgagaccaacctgttcattatggc
attaccgaaggcatgctgacactgatgcgccaacacgttaatgcaggaaaccaaattctg
gtttttgttaatcgtcgaggttatgcgcctgccatgttatgccatcactgcggggaaacc
gttacctgtaagcgttgtgataaaccctatacggtgcataaatcgcaaaatcgattgcaa
tgtcaccactgtgcagcaaccagagccattccacgtcattgtgaagtgtgtcacagtact
gaattagtgacggcgggcaccggcacagagcaagtagaaaagggccttgaaacgcttttc
cccgacgccaaacaagtgcgaatagacagcgataccataagggggaaagacaaattacac
accaccctggatgctattaataatcgtgaataccagttactcgttggcactcaaatttta
tcgaaaggccaccattttcctcacgtgacactggtggtggttctcgattgtgacggggcc
ttgttcagtgctgattttagagccgcagaaaagttagcgcaattggttacccagttagcg
gggcgagcgggaagagccagtaaacccggagaaatgtggttacaaacccacaaccctcat
catccgttgttgcaagatttggtcaacaatggctatgcccactttgctcgccatgcatta
atggaaagaaaggcagcaggtttgccgccttatattagtcaaattgtcattcgtgcggaa
gccacagacagcgcgttagtctttcgttttttacagcaatgtaagcacattctcatgccg
tcagggtctaccagccccagtgtggcgggcccatttccttgtttaatggaaaagcgacaa
gggcgttaccggtttatgttagtgtgtagcaatgaaaagcgcggcccgcttcatcatggc
ttacgggtggcactgccttacatgcaggcactacctgatgcggctaaagtgcgttggtcg
gtggatattgatcctaccgatttcagttag
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