Alteromonas australica H 17: EP13_17040
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Entry
EP13_17040 CDS
T03220
Name
(GenBank) RNA polymerase factor sigma-32
KO
K03089
RNA polymerase sigma-32 factor
Organism
aal
Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:
aal00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aal03021
]
EP13_17040
Transcription machinery [BR:
aal03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
EP13_17040
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
GntR
HTH_25
HTH_11
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
AIG00248
UniProt:
A0A075PA82
LinkDB
All DBs
Position
complement(3822453..3823307)
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AA seq
284 aa
AA seq
DB search
MSNNLQSMALSVPHNGSIEGYIQAVSSIDMLSAEEERELAVRLREDEDLQAARKLVMSHL
RFVVHIAKSYSGYGLPQADLIQEGNIGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEFVL
KNWRIVKVATTKAQRKLFFNLRKAKKRLGWFTHEEVQTVANELGVSTKEVLQMEARMSSQ
DQAFDLSADEDETGNFAPVQFLEDKSSDVETDVINSDWDANASKRLYSAIKTLDERSQDI
IETRWLADSKITLQDLADKYEVSAERVRQIEKNAMKKLQAAMVA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacaacttacaatcaatggcactgtcagtgcctcacaatggtagcatcgaaggc
tacattcaagctgtgagcagcattgatatgttaagtgcggaagaagagcgtgagctcgct
gtccgtcttcgcgaagatgaagatctccaagctgcacgtaagctggtgatgtcgcatctg
cgttttgttgtgcatattgcaaagtcttattctggctatggcttgccacaagccgacttg
attcaagaaggtaatattggcttgatgaaagccgtgaagcgtttcgaccctactgtgggt
gtacgcctagtgtcttttgcggtgcactggattaaagctgaaattcatgagtttgtgctt
aaaaactggcgtattgtgaaagtcgccaccacaaaagcacaaagaaagcttttctttaac
ctacgtaaagcgaaaaagcgtttgggttggtttacgcatgaagaagtgcaaactgtggct
aatgagctcggtgtgagtacaaaagaagtgcttcaaatggaagcgcgaatgagcagccaa
gatcaagctttcgatttgtctgctgatgaagatgaaactggcaattttgctcctgtacag
tttctagaggataaatcgtcagatgttgaaactgatgttatcaacagtgactgggatgcc
aacgcaagtaagcgtctttactctgcgatcaaaaccctcgacgagcgtagtcaggacatt
attgaaacccgttggttggcagacagtaaaattactttgcaagatttggccgataaatat
gaagtgtctgcagagcgtgttcgtcaaatagaaaagaacgcgatgaaaaaacttcaagct
gctatggtggcgtaa
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