KEGG   Alteromonas australica H 17: EP13_17420
Entry
EP13_17420        CDS       T03220                                 
Name
(GenBank) helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
aal  Alteromonas australica H 17
Brite
KEGG Orthology (KO) [BR:aal00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:aal03400]
    EP13_17420
Enzymes [BR:aal01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     EP13_17420
    5.6.2.6  RNA 3'-5' helicase
     EP13_17420
DNA repair and recombination proteins [BR:aal03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    EP13_17420
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C ResIII Cas3-like_C_2 SNF2-rel_dom AAA_22 AAA_30
Other DBs
NCBI-ProteinID: AIG00317
UniProt: A0A075P3C3
LinkDB
Position
complement(3906250..3908703)
AA seq 817 aa
MTAKRPTIPDVFTHWFSSKAWRLRPYQKQMLVNKDKYKVTLLIAPTGAGKTLSGFLPSLV
ELTENQHKGLHTLYISPLKALTQDIHRNLLQPIEEMALPITAETRTGDTPSHKRQRQRRK
PPHILLTTPESLMLMLSYADADTLFGKLKRVIIDEAHSLNTNKRGDFLSLALARLNTLSP
DLQRIGLSATVAYPQTLGAWLAGSENTAHVIKVKAGKKPKIKIVKSKARIPFGGFMARYA
IDDIYHAIAQARTALVFVNTRAQAEMLFQHLWEANTQALPIALYHGSLSKEQRRKTESLM
ATGELRAVVCTSALELGIDWGDVDKVIQVGAPKGVSRLLQRIGRANHRLDEPSDALLVPA
NRFEALECQAAITAIKKGQLDGESPQPGAMDIIPQFILNCLCSYPSTPEALYKEILNATP
YQGLDKDDFNKLWQFTLDGGSALNAYERYQRLTKNNDGTYSPANKRVIQRHRQNIGTIVE
AGRLKVKRIRRGNQGKVIGEVEEYFAQQLVPGDTFYFAGQVLKFEAIRDMQLHAKPAKAK
EAKIPSYAGGQMPLSTFLADGVRDILANPSMWRNLPAQVKEWLGLQQAFSTLPSPGQLLV
EQFPFRQTHYTLFYTFDGRKANQTLGMLITRRMEKMSIKPLSFSVTDYGLSISAVNRISE
AQLTTLFQPDILGDELEDWMLQAPMLKRSFRQVAVVSGLTEQRYHAAQKTMKQVTFSTDL
IYDTLREHDPDHILLTVARADAERELLDIKRLANLLIRYVGKTTLVNLEKVSPMAIPIVL
DVRSEQIKGAGAHAMLEQANLYAEAESMLDEVRALLS
NT seq 2454 nt   +upstreamnt  +downstreamnt
atgacagctaagcggccaacaattcctgacgtttttacacattggttttcgagtaaggca
tggcgtttgcgaccttatcaaaagcaaatgttagtgaataaagataagtacaaggtgacg
ttactaatagcgcctacgggcgctgggaaaaccctatcgggatttttacctagcttagtc
gagctaactgaaaatcagcataagggcctacatacactttatatctcgccgctaaaagca
ctgactcaagatattcacagaaacttgctgcagcccattgaagaaatggcattgccgatt
actgccgaaacccgtaccggagataccccctctcataaacggcaaaggcagcgacgaaag
ccgccgcacattttgctcactaccccagagtctcttatgctgatgctaagttatgcggac
gcagacaccttatttggcaagcttaagcgggtgatcatcgatgaagcgcacagcttaaat
acgaacaaacggggcgactttttatcgctagccttagcgcggctaaatacgttgtcgccc
gaccttcaacggatagggttatcagccaccgtggcttacccccaaacgttaggtgcttgg
ttggccggtagtgaaaatacggctcacgttataaaagtgaaagcgggtaaaaagccaaag
ataaaaatagtgaaatccaaggctaggataccgtttggcggatttatggcgcgctatgct
attgacgatatttaccacgctatcgctcaagcacgcactgctttagtgtttgtcaatacg
cgagcacaagctgagatgctattccaacatttatgggaagccaatacacaggcgctgccc
attgcgctttaccatggctctttgagtaaagagcaaaggcgaaaaacggaatccttgatg
gctactggtgaactacgagctgtagtgtgtacgtcagcacttgagcttgggatcgactgg
ggggatgtggataaagtcattcaagttggcgcgcctaaaggggtaagccgtttactccag
cgaataggccgagccaaccatagattggatgaaccgagtgatgcgcttcttgtgccagca
aataggtttgaggcgctagagtgccaggcggcgattaccgcgataaaaaaagggcagcta
gatggtgagtctccccaacccggggcgatggatattatccctcagttcatactgaattgt
ttgtgtagttaccctagtacacctgaagcgctgtataaagaaatactaaacgctacgccc
tatcaagggttggacaaagacgactttaacaaattgtggcaattcacccttgatggcggt
agcgccttaaatgcctatgaacgataccaacggctgactaaaaataacgatggcacctat
tcgcccgcgaacaagcgagtgattcagcggcaccggcaaaatataggtaccatagtcgaa
gcaggaagattaaaagtaaagcgcattcggcggggcaatcaaggtaaagttatcggcgaa
gttgaagagtatttcgcgcaacagttagtgccaggagataccttttactttgcggggcaa
gtacttaaatttgaggctatccgcgacatgcaattacatgcaaaaccggcgaaggcgaaa
gaagcaaaaataccgagttatgccggagggcaaatgcccttatctacgttcttagccgac
ggcgtaagggatattcttgctaacccttccatgtggcgtaatttaccagcacaagtgaaa
gagtggttaggcttgcaacaagctttctcaaccttaccgtctccagggcaactgttggtt
gagcaatttccatttagacaaacccattacacgcttttttatacctttgacggcagaaag
gccaaccaaaccttaggcatgttaattactcggcgtatggaaaagatgagcattaagccg
ctgagttttagtgtgacagactatgggctgtcgattagcgcggtaaatcgtattagtgag
gcgcagcttaccaccttatttcaaccggatattctgggcgatgagttagaagactggatg
ttacaggcgccaatgctgaagcgttcattcaggcaggtggctgtggtgagtggattaacg
gagcagcgctaccatgcggcgcaaaaaaccatgaagcaagtcactttctcaaccgattta
atttacgatacgctgagagagcacgaccccgaccatatcttattaaccgtagcccgagca
gatgctgagcgtgagctgctggacataaagcgcttagcgaatttgcttattcggtatgta
ggcaaaaccacattggtcaaccttgaaaaggtgtctcctatggccattcctattgtttta
gatgtaagaagtgagcaaataaagggggctggcgcccacgccatgctagaacaagctaac
ttgtatgccgaagcggaaagtatgctggatgaagtacgggcgcttttgtcataa

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