Aureimonas sp. OT7: IGS74_05345
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Entry
IGS74_05345 CDS
T06837
Symbol
rpoN
Name
(GenBank) RNA polymerase factor sigma-54
KO
K03092
RNA polymerase sigma-54 factor
Organism
aala
Aureimonas sp. OT7
Pathway
aala02020
Two-component system
aala02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aala00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IGS74_05345 (rpoN)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
IGS74_05345 (rpoN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aala03021
]
IGS74_05345 (rpoN)
Transcription machinery [BR:
aala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
IGS74_05345 (rpoN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_DBD
Sigma54_CBD
Sigma54_AID
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
QOG07645
LinkDB
All DBs
Position
complement(1106760..1108154)
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AA seq
464 aa
AA seq
DB search
MNLSMKLQVRQSQSLVMTPQLLQSIRLLQFGALELQGFIEREIEQNPLLEMVPSAERAAS
ALPQAPAARGGGDDDVGGPRRGHGPEFSVGSLPTMEDIADDRPGLLAHAVAELGDILPPG
DRAIGETLAMHLDEAGYMRTPAEDIAASLGCPVTQVVDCLERIRRAIEPAGLFAGSLAEC
LSIQLSRQGRMDPVMAGILSNLDLLARRDFAALRRLTGEDEDGLMEALSEIRRLDPKPGL
QFGDRAIHSVVPDVFVSSNGGSGWRIRLNSRALPRLIMHNDYRDIVSRAASAGDREYLAQ
CQNSAGWLIRSLDQRARTILKVTAEIVRRQEEFLKRGVQGLRPMTLASVAEAVSLHESTV
SRVTANKFMATPRGTFELKFFFTVAIAATDGGDAHSAESVKLRIQRLIAGETVGNVLSDD
DIALKLKDDGIELARRTVAKYREALGLSSSIQRRRELNAKCRAS
NT seq
1395 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtccatgaagcttcaggtccgccagagccaatctctggtgatgaccccccag
ttgctccagtcgatccggctgctgcagttcggggcgttggagttgcagggcttcatcgag
cgcgagatcgagcagaacccccttctggaaatggtcccgtcggcggagcgggcggcatcc
gcgctaccgcaggcgcctgccgcgcgcggcggcggcgacgacgatgtgggcgggccgcgg
cgtgggcatggaccggaattttcggtcggcagcctgccgacgatggaagacatcgccgac
gacaggcccggcctgctcgcgcatgccgtggcggagctgggcgatatactgccgcccggc
gacagggcgatcggcgagacgctcgccatgcatctcgacgaagccggctacatgcgcacc
cccgccgaggatatcgcggcttccctcggctgtcccgtcacacaggtcgtcgattgcctg
gagcgcattcgacgggcaatcgagccggccgggctgtttgccggaagccttgccgagtgc
ctgtcgatccagttgtcacgacagggccgaatggacccggtcatggccggcatcctgtcc
aacctcgatttgctggcccggcgcgacttcgcagccctgcggcgcctgacgggcgaggac
gaggacggcctgatggaagcgctgtcggaaatccgccgcctggacccgaagcccggcctg
cagttcggcgaccgggccatccacagcgtcgtgcccgatgtcttcgtatcgtctaatggc
gggtccggctggcgcatacggctgaacagccgcgccttgccgcgcctgatcatgcataac
gactaccgcgacatcgtttcccgcgcggcgtcggcgggtgaccgggagtatctggcacaa
tgccagaattccgccggctggctgatccgctccctggaccagcgcgcccggaccatactc
aaggtgacggccgagatcgtccgccggcaggaggagttcctcaagcgcggcgtgcagggc
ctgcgtccgatgacgctggcctcggtggccgaggcggtctcgttgcacgaatccacggtc
agccgggtaaccgccaacaagttcatggcgaccccgcgtggcaccttcgagttgaagttc
ttttttacggtcgccatcgccgccacggatggcggcgacgcgcattcggccgaaagcgtc
aaactgcggatccagcggctcatcgcgggcgagacggtcggcaatgtgctgtcggacgac
gatatcgcattgaaactcaaggatgacggcatcgagctggcgcggcgaaccgtggccaag
taccgcgaggcgcttggcctctcgtcgtcgatccagcggcgccgcgaactgaatgccaag
tgccgcgcctcctga
DBGET
integrated database retrieval system
