Aureimonas sp. OT7: IGS74_14970
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Entry
IGS74_14970 CDS
T06837
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
aala
Aureimonas sp. OT7
Pathway
aala03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
aala00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
IGS74_14970 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aala03021
]
IGS74_14970 (rpoB)
03400 DNA repair and recombination proteins [BR:
aala03400
]
IGS74_14970 (rpoB)
Enzymes [BR:
aala01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
IGS74_14970 (rpoB)
Transcription machinery [BR:
aala03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
IGS74_14970 (rpoB)
DNA repair and recombination proteins [BR:
aala03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
IGS74_14970 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
Motif
Other DBs
NCBI-ProteinID:
QOG05861
LinkDB
All DBs
Position
complement(3130363..3134511)
Genome browser
AA seq
1382 aa
AA seq
DB search
MSQTTTFSGRRRVRKFFGHIPEVAEMPNLIEVQKASYDQFLMVDEPDGGRPDEGLQSVFK
SVFPISDFSGHSMLEFVKYEFEQPKFDVDECRQRDLTFAAPLKVTLRLIVFDVDEDTGSK
SIKDIKEQDVYMGDMPLMTSNGTFIVNGTERVIVSQMHRSPGVFFDHDKGKSHSSGKLLF
AARVIPYRGSWLDIEFDAKDIVYARIDRRRKIPVTSLLMALGMDGEEILSTFYNIVQFEK
DAKGWRIPFSMERIRGQKPMTDLIDADSGEILVEAGKKVTARQARQLKDKGVKALRASDE
DLFGNYLAEDIVNDRTGEVYLEAGDEIDEKTLKVLVDAGYEEISVLDIDHVTVGAYIRST
LAADKNETRQDALFDIYRVMRPGEPPTMETAEAMFQSLFFDAERYDLSAVGRVKMNMRLD
VDAEDTVRVLRKEDIVAVVRTLVDLRDGKGEIDDIDNLGNRRVRSVGELMENQYRVGLLR
MERAIKERMSSVEIDTVMPQDLINAKPAAAAVREFFGSSQLSQFMDQTNPLSEITHKRRI
SALGPGGLTRERAGFEVRDVHPTHYGRICPIETPEGPNIGLINSLATFARVNKYGFIESP
YRRVIEGKVTNDVVYLSAMEEAKHHVAQANAVLTDENTFVDDLVVCRHAGDNVITPRENI
DLMDVSPKQIVSVAAALIPFLENDDANRALMGSNMQRQAVPLVRAEAPFVGTGMESVVAR
DSGAAIAARRTGVVDQVDATRIVIRATEDLEAGKSGVDIYRLMKFQRSNQSTCINQRPLV
KMGDRIRKGDIIADGPSTDLGDLALGRNVLVAFMPWNGYNYEDSILLSERIVADDVFTSI
HIEEFEVMARDTKLGPEEITRDIPNVSEEALKNLDEAGIVYIGAEVQPGDILVGKITPKG
ESPMTPEEKLLRAIFGEKASDVRDTSSRMPPGTYGTVVEVRVFNRHGVEKDERAMAIERE
EIERLAKDRDDEQAILDRNVYGRLIEMLDGKSAVAGPKGFRKGTTLSASVIQEYPRSQWW
MFAVEDEKLQGELEDLRNVYDESKKTLEGRFMDKVEKVQRGDELPPGVMKQVKVFVAVKR
KIQPGDKMAGRHGNKGVVSRIVPVEDMPFNEDGTHVDIVLNPLGVPSRMNVGQILETHLG
WACAGMGRRIGELLEQYQESHDVKPLRTEIAGLLGDSDRNEKVAVFDDDSVLTLARQMKR
GVSIATPVFDGANEHDIVEMLEKAGLNGSGQVTLYDGRTGEPFDRQVTVGYIYMLKLHHL
VDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGAAYTLQEMLTVKSDDV
AGRTKVYESIVRGDDAFESGIPESFNVLVKEMRSLGLDVDLSNVAEQPQAANRDDQLPDA
AE
NT seq
4149 nt
NT seq
+upstream
nt +downstream
nt
atgtctcagacgacgacgtttagcggtcgcaggcgcgtacgcaagttcttcgggcatatt
cccgaggttgccgaaatgcccaatctgatcgaggtgcagaaggcatcctacgatcagttc
ctcatggtggacgagcccgatggcggccgtccggacgaggggcttcaatccgtattcaaa
tctgtcttcccgatttccgacttttcgggacattcgatgctggagttcgtcaaatacgaa
ttcgagcagccgaagttcgatgtcgacgaatgccgtcagcgcgacctgaccttcgcggcg
cctctcaaggtgacgctgcgccttatcgtgttcgatgtcgacgaggacaccggctccaag
tccatcaaggacatcaaggagcaggacgtctacatgggcgacatgcccctcatgacgtcc
aacggcaccttcatcgtcaacggcacggagcgcgtcatcgtctcccagatgcaccggtcg
ccgggcgtcttcttcgaccatgacaagggcaagagccattcctccggcaagctgctcttc
gctgcgcgggtcattccgtatcgcggttcctggctcgacatcgagttcgacgccaaggac
atcgtctatgcgcgtatcgatcgccgccgcaagattccggtgacgagcctgctgatggcg
ctcgggatggatggagaggaaattctctccaccttctacaacatcgtccagttcgagaag
gacgccaagggctggcgcattccgttctcgatggagcgcatccgcggccagaagccgatg
acggacctcatcgacgccgattcgggcgagatcctggtcgaggccggcaagaaggtcacc
gcgcgtcaggcccgccagttgaaggacaagggcgtcaaggcgctgcgcgcctccgacgag
gacctgttcggcaactacctcgcggaagatatcgtcaacgatcggacgggcgaggtttat
ctcgaggccggcgacgagatcgacgagaagaccctcaaggtcctggtcgatgccggctac
gaggaaatttccgttctcgacatcgaccacgtcaccgtgggcgcctacatccgcagcacc
ctcgctgccgacaagaacgagacgcgccaggacgcgctgttcgacatctatcgcgtcatg
cgtcccggcgagccgccgacgatggaaaccgccgaggcgatgttccagtcgctgttcttc
gacgccgagcggtacgatctttcggccgtcggtcgcgtcaagatgaacatgcgtctggat
gtcgacgccgaggacacggtgcgtgtcctgcgcaaagaagacatcgtcgccgtggtgcgg
acgctggtcgatttgcgtgacggcaagggcgagatcgacgacatcgacaatctgggcaac
cgtcgcgtccgctccgtcggcgagttgatggagaaccagtatcgcgtcggcctgctgcgc
atggagcgcgccatcaaggagcgcatgtcctccgtcgagatcgacacggtcatgccgcag
gatctcatcaacgccaagccggcggccgcggccgtgcgcgagttcttcggatcctcgcag
ctgtcgcagttcatggaccagaccaacccgctctccgagatcacgcataagcgccgcatc
tcggcgcttggaccgggcggtctgacgcgcgagcgtgccggcttcgaggtgcgcgacgtg
cacccgacgcattatggccgcatctgcccgatcgagacgccggaaggcccgaacatcggc
ctgatcaattcgctggcgaccttcgcgcgcgtcaacaaatacggcttcatcgaaagcccg
taccgccgcgtgatcgagggcaaggtcaccaatgacgtggtctacctctccgccatggaa
gaggccaagcaccacgtcgcgcaggccaacgctgtcctgaccgacgagaacaccttcgtc
gacgatctcgtggtctgccggcatgccggcgacaacgtgatcaccccgcgtgagaacatc
gatctcatggacgtgtcgccgaagcagatcgtctcggtggccgcggcgctcatcccgttc
ctggagaacgacgacgccaaccgcgcgctcatgggctcgaacatgcagcgtcaggccgtg
ccgctggtgcgcgccgaagcgcccttcgtcggcaccggcatggaatcggtcgtcgcccgg
gactccggcgccgccatcgctgcccggcgcaccggcgtcgtcgatcaggtggatgccacg
cgtatcgtcattcgcgcgaccgaagatctcgaggccggcaagtccggcgtcgatatctat
cgcctgatgaagttccagcgctccaaccagtccacctgcatcaaccagcgaccgctggtg
aagatgggtgaccggatccggaagggcgacatcatcgcggatggtccgtccaccgatctc
ggcgatctggcgctcggccgcaacgtgctcgtcgcgttcatgccctggaacggctacaac
tacgaggattcgatcctcctgtccgagcgcatcgtcgccgacgacgtcttcacctcgatc
catatcgaggagttcgaggtcatggcgcgcgataccaagcttggacccgaggaaatcacg
cgcgatattccgaacgtctcggaagaagcgctgaagaacctcgacgaagccggcatcgtc
tacatcggcgccgaggtccagccgggtgacattctcgtcggcaagatcacgcccaagggc
gaaagcccgatgacgccggaagaaaagctcctgcgcgccatcttcggcgagaaggcgtcg
gatgtccgcgacacgtccagccgcatgcctcccggcacgtacggcacggtcgtcgaagtg
cgcgtcttcaaccggcacggcgtcgagaaggacgagcgcgccatggctatcgagcgcgag
gaaatcgagcgcctggccaaggaccgcgatgacgagcaggcgatcctggaccgtaacgtc
tacggccgcctgatcgagatgctcgatggcaagtcggccgtggccggtcccaagggcttc
aggaagggcacgaccctgtcggcgtccgtcatccaggaatatccccgctcccagtggtgg
atgttcgccgtggaggacgagaagctccagggcgagctggaagacctgcgcaacgtgtac
gacgagtccaagaagacgctcgaagggcgcttcatggacaaggtcgagaaggtgcagcgc
ggcgacgagttgcccccgggcgtcatgaagcaggtgaaggtcttcgtcgcggtcaagcgc
aagatccagccgggcgacaagatggccggccgtcacggcaacaagggtgtggtctcgcgg
atcgttccggtcgaggacatgcccttcaacgaggacggcactcacgtcgacatcgttctg
aacccgctcggcgtgccctcgcgcatgaatgtggggcagatcctggagacgcatctcggc
tgggcctgcgccggcatgggccgccgtatcggcgagctgctggagcagtaccaggaaagc
cacgacgtcaagccgttgcggaccgagattgccggcctgctcggcgacagcgatcgcaac
gagaaggtggccgtcttcgatgacgactccgtcctcacgctggcacgccagatgaagcgc
ggcgtctccatcgcgacgccggtcttcgacggcgcgaacgagcacgacatcgtcgagatg
ctggaaaaggccgggctgaacggttcgggccaggtcacgctctacgacgggcgtaccggc
gagccgttcgatcgtcaggtgaccgtcggctacatctacatgctgaagctgcaccacctg
gtggacgacaagatccacgcgcggtccatcggaccctactcgctggtcacgcagcagccg
ctgggcggcaaggcccagttcggcgggcagcggttcggcgagatggaggtgtgggctctc
gaggcgtatggcgctgcctacacgctgcaggagatgctcaccgtcaagtccgacgacgtg
gccggtcgcaccaaggtctacgagtcgatcgtccgcggcgacgatgccttcgagtcaggc
attcccgagagcttcaacgttctcgtcaaggaaatgcgctcgctgggcctcgatgtcgac
ctgtcgaacgtggccgagcagccgcaggcggcaaaccgggacgatcagttgcccgacgca
gccgagtaa
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integrated database retrieval system
