Aedes albopictus (Asian tiger mosquito): 109399943
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Entry
109399943 CDS
T06060
Name
(RefSeq) LOW QUALITY PROTEIN: CCR4-NOT transcription complex subunit 6-like
KO
K12603
CCR4-NOT transcription complex subunit 6 [EC:
3.1.13.4
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109399943
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109399943
Enzymes [BR:
aalb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109399943
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109399943
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109399943
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Exo_endo_phos
LRR_14
LRR_8
LRR_4
LRR_LRWD1
LRR_1
LRR_NXF1-5
LRR_R13L1-DRL21
Motif
Other DBs
NCBI-GeneID:
109399943
NCBI-ProteinID:
XP_019527941
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MSRNKDKYDNNNPRRQQTFLTAEDIAAGKKTCWHGVEITGSVRNLSPTLWKFEHLTALYL
NDNCLMRLPHQIGQLANLRTLDLSSNKLRSLPAELGELIHLRELLLNNNLLRVLPYELGK
LFHLHVLGLHGNPLGKDVMSIYNEPNGTQKLLTYMLDNLSVTVAPPPQRPWIPLARPNRT
RGACIFTVMCYNVLCDKYATRQMYGYCPSWALSWEYRKKAILDEIRHYSADIISLQEVET
DQFFNFFKPELKNDGYEGIFSPKSRAKTMSESDRKYVDGCAIFFRSSKFSLIKEHLVEFN
QLAMANAEGSDHMLNRVMPKDNIGLAALLKVKESAWEGVAEQVAASQPILVCTAHIHWDP
EFCDVKLIQTMMLSNELKTILDEVGHSFRPGHKFDVNNVQLVLCGDFNSLPDSGVIEFLS
AGRVSMDHQDFKELGYKSCLQRISNCDTPNEFTHSFKLASAYSEDIMPYTNYTFDFKGII
DYVFYSKQGMIPLGLLGPISSDWLRENKVVGCPHPHIPSDHFPLLVELELIHLSSTQPPN
GLIGRR
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgtcccgcaataaagacaagtacgacaacaacaacccccgacggcagcagacctttctc
acggcggaggatattgcggccggcaagaagacctgctggcatggcgtcgagataacgggt
agtgtgcgcaacctcagccccacgctgtggaagtttgagcatctgacggcgctctacctg
aacgacaactgtctgatgcggctgccgcaccagatcggccagttggcgaatctgcgtacg
ctggacctgtccagcaacaagctgcggagcttgccggccgaactgggcgagctgatacac
ctgagggaactcctgctgaacaacaacctgctgcgtgtgcttccgtacgagctgggtaag
ctgttccatctgcacgtgctcggactgcacgggaacccgctcgggaaagacgttatgtcg
atctacaacgagcccaacggaacgcagaagctgctcacttacatgctggacaatctgtca
gtaaccgtggcaccgccgccgcaacgtccctggatacctttagcgaggccaaatcgaacc
aggggtgcatgcatattcaccgtcatgtgctataacgtactgtgcgataagtacgccacc
agacagatgtacggttattgtccgagttgggccctgagttgggagtatcggaaaaaggca
attttggacgagatccggcactattcggccgacatcatcagtctgcaggaggtcgagacg
gatcagttcttcaacttcttcaaaccggaactgaagaacgacggctacgagggcattttt
tcgcccaagtcccgtgccaagaccatgtccgagtcggatcggaagtacgtcgacgggtgt
gcaattttcttccgttcatccaagttctctctaattaaggaacacctggtcgaattcaat
caactggcgatggcaaatgcggaagggtcggatcatatgctaaatcgggtaatgcccaag
gacaacattgggctggcggcgctgcttaaagtgaaggaaagtgcatgggaaggtgtcgcg
gaacaagttgccgcttcgcaaccgattctggtgtgtacggcgcatattcactgggatccg
gagttctgcgatgtcaagctcatccagaccatgatgctgagcaacgagctgaaaacgata
ctggacgaggttggtcacagcttccggccagggcacaagtttgatgtgaataatgtgcag
ctggtcctgtgcggcgacttcaattcgctgccagactccggagtgatcgaatttctcagt
gccggacgtgtatcaatggaccatcaagatttcaaggagctgggctacaaatcctgcctg
cagcgtatatcaaattgtgatacaccaaatgaatttactcattcctttaagctagcgtcg
gcgtacagtgaagatataatgccatatacaaattatacattcgattttaaaggtattatt
gattatgtattttactcgaagcaaggtatgatcccgctcggtttgctcggtccaatctcg
tcagattggctgcgggaaaacaaagtggtcggatgtcctcatccgcacataccatcggat
catttcccattattggtggaacttgagctaattcacctgagcagtacgcagccacctaac
ggactcattggtcggaggtag
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