Aedes albopictus (Asian tiger mosquito): 109400979
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Entry
109400979 CDS
T06060
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109400979
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109400979
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109400979
mRNA degradation factors
5'-3' decay
Decapping complex
109400979
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
DUF3824
Motif
Other DBs
NCBI-GeneID:
109400979
NCBI-ProteinID:
XP_019528992
LinkDB
All DBs
Position
Unknown
AA seq
807 aa
AA seq
DB search
MDSFFDFDTNLPPMAGADNNGRGGAAGRLIDSEDEYDALNGETFGPDPDKGDWENMHESL
VRLENGGNGITTTDNAILGTGALGLFDDDEIDLHFPRFELTDGDESLCSSGADLSLDDDL
CTRLRLDPSIWDSPVKQPAVQTFPQSLVQNEMIRPPGFHLHASNVPIKMMSVEDIERNII
EQQRQECLKKEKEQQRKLQQENRKNKESKQHKQQSPGSMAVTPMIQPLLPPAQLLTPRSQ
MFPPPPLLNHQSRVPVGFLPYSFLPTHYPAPINNLAMHPSFPAGIVRPQLGFIPRVPVPI
QPNIIXNIQTSQFNRKLVEEIQQNHPLLSFHRQQNLHSNSNYKNHSNQRFHPNNIPNGIS
FDQHANMMTNREKQWLIGIQLTQLNSDTPYISDYYFTVYKERLRTKSKAPNASQAYQDNQ
RNHPFTTQPRNHAQLLLMSSLARGGSAGGSTANHRDRKNSETTAKNGNEGQKDQQQNHRS
YTPLQFENSLGKLQCGSVKAPRKMIDMDVVGNESAPSQPPRELSMHRKSRHVLLHIETLY
KVVLKMEDLNNPVAIRAAAIAKEKREREQLQNNDGSSEEIEPERFDELLTELMGGLTHDK
VTPMLSVRKGKVLLRRICVLLRDDPSRWALWRSIFSAIPLLLKKDRDDRDGVLFALYTEF
ERHVQYSAFPDLLKLAQVIATEKILSYLTGCKFLLSSIITIVFQMEVFIVKKSPNMATAS
EVESWVQCLSLVMETTGKLLSGSGAVKISAHHTIKIERENNIVRTIRAHLDRFSEHVKGN
DFLDFITDGIPSSGDNGSKAVAVTDTK
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtttttcgacttcgatacaaatttgcctccgatggcgggagcagacaataat
ggccgtggaggtgccgccggccgccttatcgactccgaagacgaatacgacgcgcttaat
ggggaaacgtttggcccggacccggacaagggggactgggagaacatgcatgaatcgctg
gtccggttggagaatggtggcaatgggataacgacgacggataatgccatcctcggaacg
ggagcgctagggctgtttgacgatgatgagattgatttacactttccaagatttgaacta
actgatggcgacgaaagtctatgcagtagtggagcagatttaagtctagacgacgatctc
tgcacccgacttaggttggatcccagcatttgggatagcccggtgaaacaaccggcagtt
caaacgtttccacagagtcttgttcaaaatgaaatgataaggcctccagggtttcattta
catgcgtctaatgttccgattaagatgatgtcggtagaagacatcgagcgtaacattatc
gaacaacaacggcaagagtgcctgaagaaagaaaaggaacaacaacggaaattacaacag
gagaataggaaaaacaaagaatccaaacaacataaacagcagtctcctggaagtatggca
gtgaccccaatgattcaaccgttgttgcccccggcacagctactaacaccccggagtcaa
atgtttcctccgccacccctgctgaaccaccaatctcgagttcccgtgggcttcttacca
tacagtttccttccaactcactatccagcgccaatcaacaatctggcgatgcatcctagt
ttccctgccggaatagttcgtccccaactgggattcattccacgcgttccggtgcccatc
cagccgaatataattncaaacatacaaactagtcaattcaatcgaaagttggttgaagaa
attcaacaaaatcaccccttgctttcttttcatcggcagcagaatttgcacagcaacagc
aattataagaatcacagcaatcaacggtttcatcccaacaacattccgaacgggataagc
ttcgatcagcacgccaacatgatgaccaaccgcgaaaaacagtggctaatcggcatccag
ctgactcagcttaattcggacacaccctacatcagcgactactacttcaccgtgtacaag
gaacgactgcgaaccaaatcaaaagcacccaacgcaagtcaagcgtaccaagacaaccag
cgaaatcatccctttaccacccagccgaggaatcatgctcagctattgctgatgtcatcg
ttggcaagaggtggcagtgctggtggctctaccgcaaaccaccgagacaggaagaattcg
gaaacgacggcgaagaacgggaatgaagggcaaaaggatcagcagcagaatcacaggtcg
tacacgccgttgcagttcgaaaattccctcgggaaactacaatgcggcagtgtgaaggcc
ccccgaaagatgatcgacatggatgtcgttggaaacgaatctgcaccaagccagccaccc
agggagctgtccatgcatcggaagtcccgtcacgttttgctccatattgaaacactgtac
aaagttgtgctgaagatggaggatttgaacaacccggtggcgatccgtgctgctgcaatc
gccaaagagaaacgggagcgagaacaactgcagaataacgacgggtcttctgaggagatt
gaaccggaacgcttcgatgagttgctgacagaactcatgggtggtcttacgcatgataaa
gttacaccaatgctgagtgtacgcaagggcaaagttcttcttcggcgaatttgtgttttg
ctgagagatgatccgagccgctgggccctctggcgatcgatcttttcagcaattccactc
ttgctgaaaaaagatcgggacgaccgggacggagtcttgttcgctttgtacaccgagttc
gagcgacacgtccagtacagtgcattcccggaccttttgaaactagcgcaagtgatcgca
acggaaaagattctatcatatctgaccggttgcaagtttttgctttcctcgatcatcacc
atcgtgttccagatggaagtatttatcgtcaagaagtcccccaacatggccactgccagt
gaagtggagagctgggttcagtgtttgagtctcgtaatggagacgaccggtaagttacta
tctgggagcggagcagttaagatcagcgcacatcacacgatcaagattgagcgggaaaac
aacatcgtgcgaaccattcgtgcccacctggatcgcttctcggagcacgtgaagggaaac
gattttctggacttcatcacggacgggataccatcttccggcgataatggcagtaaagcg
gttgccgttacggatacaaagtga
DBGET
integrated database retrieval system
