Aedes albopictus (Asian tiger mosquito): 109400981
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Entry
109400981 CDS
T06060
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(V) chain-like
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
109400981
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
aalb00536
]
109400981
Glycosaminoglycan binding proteins [BR:
aalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
109400981
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
COLFI
Laminin_G_2
DTHCT
Motif
Other DBs
NCBI-GeneID:
109400981
NCBI-ProteinID:
XP_029710136
LinkDB
All DBs
Position
Unknown
AA seq
1820 aa
AA seq
DB search
MVDIRLSHRQRRGSTTIFGARLPVERIRISAIIVIIAVGLLGSGSAVSKDGLVDLIEQFD
LPRLPSGVTPGAGMCGNETRNDYQTYPAAAYNLNQDTVLSIGTTQVFPNGFPSDFSILVV
LKATPNLVRVPLFTVYSSDSEEVLMLMVGMEVALYYQDTDGNPEEESLISFGVSIDDERW
NRLGVSVKGDSVTLIKDCNEQVTRRLRREAGSVIATDGLILTGVQLNEDDGFFTGDLQLF
MFADTPDEAFHICTKYAPDCVGMSQGSGTVVSSVHSYSTQTVSGQNRSSSSSHHHSQDFS
NSRDQVNKFAVSSSGSSGNSFEGQREFVDITGDADGLDIIGEDDEYYNNLELEGEDRQVE
QHQTSTSTQRSNTKWHRVEINRTRPGTVDQTSRRPILPLPDPEYDSSASSNNRPGGVPPA
VEQDHDPDDTSVSFPASPTGNYSITGYRTIIGPRGPPGEPGPRGEPGRDGLQGQSGPPGQ
PGHVFMIPLSQTANEKGPDSQAEAFRAMLSQHMMAMRGADGPMGLTGVPGPVGPPGPEGT
KGEPGDHGEPGPRGLRGAHGPSGREGRRGRAGRDGERGAVGLQGSKGEPGPLGLPGMVGE
KGERGRHGNIGEKGTQGHEGIQGEDGPPGLPGLPGELGPRGFAGPRGFPGPSGNPGIPGT
EGLPGVKGNPGPQGQPGAPGQTGPIGPVGPPGPQGNMGPPGIAGPHGKPGIPGLPGADGA
PGREGSPGIGGPKGDIGPQGVQGSIGFPGNRGPKGDDGERGSPGDKGDKGEQGHDGEKGD
MGPPGERGLTGPIGTAGIEGPEGPKGFEGPRGETGQMGLTGEKGKQGVQGFAGYPGPTGD
KGDKGIVGISGLAGDKGERGNTGLQGERGEVGPRGFRGARGRRGADGNTGPKGDTGQPGS
SGPQGEMGPQGMEGPRGFIGLPGPPGNNGKDGPQGTPGERGPPGESGNPGPTGNPGVIGP
QGPTGEPGPVGEPGIPGLPGMPGEPGVPGDSGKEGQVGPPGPPGKNGPPGGQGLPGFPGE
RGMMGMPGLPGLKGELGVPGLAGPVGDKGQPGEPGKEGPPGPEGRRGPPGPTGPSGLKGE
RGEMGLIGPIGRDGLPGQRGLTGPPGPQGSPGEDGDKGDIGPPGEKGFKGSQGEAGPVGS
PGAQGSRGEPGAIGPPGEKGPPGEMGRAGSKGEDGPTGLPGPPGPAGAQGMPGPSGIKGD
RGDDGLVGPVGSIGPPGEPGRRGPRGAEGAPGATGPPGPQGLIGEPGSQGPPGPDGPEGK
DGDKGAPGPKGEEGKSGPPGPPGKRGPAGPEGPKGVVGSPGFPGNPGEPGVVGPKGDTGK
DGDDGKQGEPGQPGDPGPQGIPGEVGPPGKMGPEGPAGXTGSVGPSGEKGDRGLPGPIGN
PGLVGPQGMPGAQGLPGLRGSPGASGEIGPVGKPGESGPPGKIGETGSKGQKGDRGRRGL
KGHRGELGMVGLKGDTGEKGDKGVRGNAGPDGPKGPAGPVGPIGLKGNDGPQGPPGNEGP
LGPKGSDGVAGLKGEAGPPGPPGPPGPPADAPLIPPELLFRMSEFSMTKGEDRMKREAED
IPEEEDDFDEELLKIEPKKKKKKKKTKDDLGPKFLDMYSSIYSMRQELDRIRKPVGTREN
PGRTCRDLHYGHPQFKDGWYWIDPNLGMADDAVYVYCNMTAEGETCVFPDLHSSQMPNIP
WRKENDKTDWYSNLRGGFRISYETVGVVQMTFLRLLSEGAYQNFTYTCMNSVAWYSNQEQ
NHDDAIRFMGDNEIDIGYENSKLRPNVLVDGCKTGKSKSETVFEIRTTKLQYLPIIDFYP
VDYGQPQQAFGFQVGPVCFK
NT seq
5463 nt
NT seq
+upstream
nt +downstream
nt
atggtagatatacgattgtcccatcggcagcggagaggatcaacgacgattttcggtgcc
cgattgccggtggaacgaattaggattagtgcaatcattgtgatcatagccgtcggactg
cttgggagcggcagtgcagtgtctaaagatggcttagtcgacctgatcgagcagttcgac
ttacctaggcttccgtctggcgtcacgccaggtgccggcatgtgtggcaatgaaacccgc
aacgattaccaaacctacccggcagctgcatacaacctgaaccaggacacggtgctcagc
ataggaacgactcaggttttcccgaatggctttccatcggatttctccatcttggttgtg
ctcaaggcgacaccaaatctggtacgggttccactgttcacggtgtattcgtccgattcc
gaggaggttctgatgctgatggtcgggatggaagttgccttatactatcaggatacggac
ggtaatccggaggaggaaagcctgatcagttttggagttagcatcgatgacgaacggtgg
aaccggttgggagtcagcgtcaagggtgattccgttacgttgatcaaagactgtaacgaa
caggtcacgcggaggctaaggcgagaggctggttcggtcatagctacggacgggttgatt
ctgacaggggttcagctcaatgaggatgatgggttttttactggagaccttcagttattc
atgtttgctgataccccggatgaggcgttccacatctgtactaaatatgcacccgactgt
gtagggatgagccaaggatctggaactgtggtttcaagcgtacatagttattcaactcaa
actgtatcaggacagaacagatcttcatcgtcgtcacaccaccatagtcaagatttcagt
aattcaagagatcaggtcaacaaatttgccgtatcatcttcggggtcatcaggcaatagc
ttcgaaggacaaagggaattcgtagatattactggagatgccgacgggttagatatcatc
ggagaagatgatgaatactataacaatttggagttggaaggagaagatagacaagtagag
cagcaccaaactagtacaagtacacagcgtagcaatactaaatggcatagggtggaaatc
aaccgtactagaccagggactgtcgatcagacgagtaggagacctattctaccacttcca
gatccggaatatgattcgtcagcttcaagtaataatcgacctgggggagttccgccggcc
gtagaacaagatcatgatcctgacgacacttcggtttcgtttccagcgtctcccaccggt
aactacagtattactggttaccgaaccataataggtcccagaggacctccaggggaacca
ggaccaagaggtgagcctggacgagacggtctacagggccaaagtggacctcccggtcaa
ccaggtcacgtcttcatgattcctctaagccaaactgccaacgagaaaggtccagactcc
caagcggaggcattccgtgccatgctgtctcagcatatgatggcaatgcgaggtgcggat
ggaccaatgggattaacgggagttcctggtccagttggtcctccgggcccagagggaacg
aaaggtgaaccgggagaccatggtgaacctggaccacgaggcctacgaggagcgcatgga
ccatctggccgtgaaggtcgtcggggacgagccggtagggatggggaacgaggagctgta
ggcttacaaggctccaaaggcgaaccaggtccacttgggctccctggtatggttggcgag
aagggtgaacgaggtcgacatggaaacattggcgaaaagggtacacaaggacatgaagga
attcaaggagaagatggacctccgggattgcctggccttcctggagaattaggaccacga
ggttttgctggacctcgtggcttcccaggtccatcaggtaatccagggatcccaggaaca
gaaggcctgccaggcgttaaaggaaatcctggtccacaaggtcagccgggagcgccaggt
caaactggcccgatcggtccagtaggacctccaggaccacaaggcaatatgggaccacca
ggcatcgcaggtcctcatggtaaacctggaattcctggactccctggagcagatggtgca
ccaggacgcgagggtagccctggcatcggtggacctaaaggtgacattggtccacaagga
gtacaaggttctattggcttccctggaaaccgaggtccaaaaggtgacgatggagaacga
ggctcaccaggtgacaaaggggataaaggtgaacaaggccacgatggtgaaaagggtgac
atgggtccaccaggtgagagaggtttaactggccccataggcactgctggaattgaagga
cctgaagggccgaagggatttgaaggaccccgtggagaaactggccagatgggattgaca
ggcgaaaagggtaaacaaggtgttcaagggtttgccggatatcctggaccgacaggcgac
aagggtgataaaggaattgtgggcatttccggactagctggcgataagggtgagagggga
aacactggacttcaaggagagcgtggtgaagtggggcctagaggtttccggggagctcgt
ggtcgacgaggagcggatggaaatacgggacctaaaggtgataccggacaaccaggatcc
tcgggaccgcagggagaaatgggcccccaaggtatggaaggcccacgtggtttcataggt
cttcctggtccaccaggcaacaacggcaaagatggtcctcaaggaaccccgggagaacgt
ggtcctccgggtgaaagcggcaacccaggtcccactggtaatccaggtgtcattggtcca
caaggacctactggagaaccaggtccagttggcgaacctggaattccaggattaccagga
atgccgggagaacccggtgttcctggtgatagtggtaaagaagggcaagttggtccacca
ggaccgcctggcaaaaatggacctccaggcgggcagggtctgcccggattcccaggagag
cgaggaatgatgggaatgccgggtcttccgggactgaaaggagaactcggcgtgccaggt
ttagcggggccagttggtgacaaaggacagccaggtgaaccaggaaaagaaggaccaccc
gggccggaaggacgaaggggcccaccaggacccactggcccatcaggattgaaaggcgaa
agaggtgaaatgggactgattggacctattgggcgtgatggactgcctggacagcgaggt
ttaactggccctccaggaccacaaggttcacccggcgaggatggtgataagggagatatt
ggacctcctggagagaaaggtttcaagggatctcagggtgaagctggtccggttggatca
ccgggtgctcaaggaagccgtggtgaaccaggtgcaattggacctcctggcgagaaagga
ccaccaggagaaatgggtcgtgcaggatcgaagggagaagacggtccaacgggccttcct
ggtccgccaggtccagcaggcgcacaaggaatgcctggaccatccggaatcaaaggcgac
cgtggcgatgacggacttgttggacctgtcgggtctattggtcctcccggagaacctggt
cgacgcggcccaagaggagctgaaggtgcaccgggagccaccggtccacctggaccccaa
ggtttgattggtgagccgggatcgcagggacctccaggtccagatggaccggaaggcaag
gatggcgataaaggagctccgggaccaaaaggcgaagaaggtaaaagtggacctcctggg
ccacccggcaagagaggtcctgcagggcctgaaggaccgaaaggtgtggtcggatctcct
ggttttcctggtaatcctggcgagcctggcgtagtaggacctaagggcgacaccggaaaa
gatggagacgacggaaagcaaggcgaaccgggacaacctggagatccaggtccgcaaggc
ataccaggtgaagtggggccaccaggtaaaatgggaccagaaggcccagcagganttaca
ggatcagttggtccatcaggggagaaaggagatcggggattgccaggtccgatcggtaac
cctggcttggttggtcctcagggcatgccaggagcccaaggtctaccagggctgcgtggg
tcaccaggtgcttccggagaaattggacctgttggaaagcctggagaatcgggaccacct
ggaaaaattggcgaaactggttcaaagggtcaaaagggtgaccgaggccgacgaggtttg
aaaggacacagaggtgaacttggtatggttggtttgaaaggggatactggagagaaaggt
gataaaggagttagaggaaatgcaggtccagatggtccgaaaggtcccgccggaccagtt
ggtccaatagggttgaagggcaacgacggtccacaaggtcctccgggtaatgagggacca
ttaggtccaaaaggttcagatggtgttgctggtctaaaaggagaagcggggccaccagga
cctccaggtccaccgggtcctccagctgatgcccctctgattccaccagaactgttgttc
aggatgagtgaattcagtatgacaaaaggtgaagaccgaatgaaacgagaagctgaggac
attccagaagaagaggacgacttcgacgaagagctactgaagattgagcctaagaaaaag
aaaaagaagaagaagaccaaagacgacctaggtccaaagtttttggatatgtacagttct
atctactctatgcgacaggaattggatcggattaggaaacctgtaggtaccagagagaac
cccggcagaacttgccgagatttgcattacgggcacccacagttcaaggatggttggtac
tggatcgatccgaatctgggcatggcggatgatgccgtctacgtctattgcaacatgact
gccgaaggagaaacgtgcgtgttcccggatttgcacagctcccagatgccgaacattccg
tggaggaaggaaaacgacaagaccgattggtattcaaatctcagaggcggcttcaggatt
tcctacgaaacggtcggagttgttcagatgaccttcctgcggttactctcagaaggtgca
taccagaactttacgtacacttgcatgaacagtgtcgcctggtacagcaatcaagagcag
aaccatgacgatgcgatacgcttcatgggcgacaacgagatcgacatcggttacgagaac
tccaaattgcgaccgaatgtcctggtggatggctgcaaaactggcaagagcaaaagcgaa
acggtttttgaaattcggacgaccaaactgcagtatcttcccatcattgatttctatccg
gtggactacggtcaaccgcaacaggcgttcggcttccaagttggacccgtctgcttcaaa
tag
DBGET
integrated database retrieval system