Aedes albopictus (Asian tiger mosquito): 109405747
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Entry
109405747 CDS
T06060
Name
(RefSeq) regulator of nonsense transcripts 1 homolog
KO
K14326
regulator of nonsense transcripts 1 [EC:
5.6.2.5
5.6.2.3
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03013
Nucleocytoplasmic transport
aalb03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
109405747
03015 mRNA surveillance pathway
109405747
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109405747
Enzymes [BR:
aalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
109405747
5.6.2.5 RNA 5'-3' helicase
109405747
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
109405747
mRNA cycle factors
Common to processing body (P body) and stress granule
109405747
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UPF1_Zn_bind
AAA_12
AAA_11
UPF1_1B_dom
AAA_30
AAA_19
ResIII
SLFN-g3_helicase
DEAD
Helicase_RecD
ATPase
NPHP3_N
AAA_22
nSTAND3
AAA_32
AAA_16
SRP54
AAA_10
TetR_C_28
AAA_5
AAA
Motif
Other DBs
NCBI-GeneID:
109405747
NCBI-ProteinID:
XP_019534360
LinkDB
All DBs
Position
Unknown
AA seq
1122 aa
AA seq
DB search
MSVDTYDGVVNSQTLTFLDTEENDLIGADTQGTDYDFRDFTIPSQSQTLASQFDHLGAGA
ASQLNGFGRRLGGSDKLKVAGITSAIGELQFEEDDADDPVAQSQELPPHACRYCGIHEPS
TVVMCNICKKWFCNGRGSTSGSHIVNHLVRAKHREVTLHGDGPLGETVLECYSCGVRNVF
VLGFIPAKADSVVVLLCRQPCAAQNSIKDMNWDQEQWKPLIADRCFLFWLVKVPTEQEQL
RARQVSAAQINKLEELWKENVDATFQDLEKPGIDKEPAQVLFRYVDGYQYQNIFGPLVKL
EADYDKRLKESQTQENIEMRWDTGLNRKTIAYFTLAKNDGDMKLMHGDELRLRYTGELHK
PWSCVGHVIKVPDNYGEDVGLELKHNHQAPIECTSNFAVDFIWKGTSFDRMQMALRKFAV
DDNSVSNYIYSRLLGHGRPDGSDDVTFRINNLPKHFSAPNLPDLNRSQVYAVKHALQRPL
SLIQGPPGTGKTVTSATIVYQLVRLNGGPVLVCAPSNTAVDQLTEKIHRTSLKVVRVCAK
SREAIESPVSFLALHNQIRNMEQNSDLKKLQQLKDETGELSSSDEKRYRTLKKQAERELL
EAADVICCTCVGAGDPRLQRIKFSSILIDESMQSTEPECMVPVVLGAKQLILVGDHCQLG
PVVMCKKAAKAGLSQSLFERLVVLGIRPFRLEVQYRMHPELSQFPSNFFYEGSLQNGVCA
DERKLKVDFPWPSPDTPMFFLVTQGQEEIAGSGTSYLNRTEASNVEKITTRFLKAGVKPD
QIGIITPYEGQRAYLVQYMQYQGSLHSKLYQEIEIASVDAFQGREKDIIIMSCVRSNEHQ
GIGFLNDPRRLNVALTRAKYGIIIVGNPKVLSKQQLWNHLLNFYKDKKVLVEGSLNNLKE
SMIQFTKPKKIVNTLNPGSHFMNNVMYDAKEAGYFERGHGSGFSSSTFGNPGPIGSMMNG
PRNQPLDVFSRTHDPISYISPDRVQAAMNNMPIPVGMFMNMPNVQPRYFQQQQAVQAAKQ
ARRIKPGVIGSKPKPRPIGPPSSQINTSGAIGTGSLTQGMSQNMSQPGFSLSQQPDFSQD
YMAEYQSQVDGLLSQESTFGPSQSAVERLAFDLPPNQFSQPY
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgagtgtggacacgtacgacggggtggtcaattcccaaacgttgacgttcctggacacc
gaggagaacgatctaatcggagcggatacccagggaacggactatgattttcgcgacttt
acgattccgtcgcagagccaaacgttggcctcgcagttcgatcacttgggtgccggagct
gctagtcagctcaacgggtttggccgtcgtttgggcggttcggacaagctgaaagtggcc
ggcataacatcggccatcggtgagttgcagttcgaggaggatgatgcagatgacccggtg
gctcaaagtcaggagttgccaccgcatgcttgccgctactgcggaatccatgagccgagc
acggttgtcatgtgcaacatctgcaagaagtggttctgcaacgggcgcggcagcacttcg
ggctcgcatatcgtgaaccacctggtgagggcaaagcatcgcgaagtgacgctgcatggc
gatggtcccctcggagaaacggtgctcgagtgttactcgtgcggtgtgcgcaacgtgttt
gtgctgggcttcattccggccaaggcggactcggttgtagtgctgctgtgcagacaacct
tgtgctgcccagaattccatcaaggacatgaactgggaccaggagcagtggaagccgttg
attgccgatcggtgtttcttgttctggctggttaaggttcccaccgagcaggagcagctc
cgtgccagacaggtatcggctgcccagatcaacaagctggaagaactatggaaggagaat
gtcgatgcaacgttccaggacttggaaaagcccggaatcgacaaggaaccggcacaagtt
ctgttccggtatgtcgatgggtaccagtatcaaaacattttcggaccactggtaaagctg
gaagcggattatgataagcgcctgaaggagagccaaacgcaggaaaatatagaaatgcgt
tgggacaccggattgaaccggaagacgattgcttattttacactagctaaaaacgatggc
gatatgaagttgatgcatggcgatgagcttcgtttgcgatatacgggggagttgcataag
ccttggagctgcgttggtcatgtcatcaaggtaccggataactacggcgaagatgtcggt
ttggagctgaagcacaatcaccaggctccgattgagtgtacatccaactttgcggttgat
tttatctggaagggtacatcgtttgatcgaatgcaaatggcgttgcgcaaattcgctgtg
gatgacaatagcgtctccaactacatctattcgagactgctgggccacggtagaccagat
ggatccgatgatgtcacgttccggattaataatcttccgaagcacttcagcgctccgaat
ctgccggatttgaatcgttcccaggtatacgcggtaaagcatgcccttcaacgtccgttg
agcttgatccaaggacctcctggcaccggaaaaacggtcacttccgctacgattgtgtac
caattagtgcgcttgaatggcggtccggttttggtgtgtgccccaagtaacacggccgtg
gaccaattgacggagaaaatccatcgcaccagcttgaaagtcgttcgagtctgtgcaaag
tctcgagaagctatcgaatcacctgtcagcttcttggccttgcacaaccagattcgcaat
atggaacagaatagtgacttgaaaaagttgcaacaactgaaagatgagactggagaattg
agttcgtccgatgaaaaacgctatcgcactttgaagaaacaggccgagcgtgagcttctg
gaggcggcagacgttatctgctgtacatgtgttggagctggtgatcctcgactgcagcgc
atcaaatttagttccattctgatcgatgaatcgatgcaatctaccgaaccggaatgtatg
gtcccggtagttcttggagccaagcagctgattttggtcggagatcactgccagcttggt
cccgtcgtaatgtgcaagaaagcggccaaggccgggttgtcccaaagtctgttcgaaaga
ttagttgtgctgggaatccgcccgttccgcttggaagtacaataccgtatgcatccggag
ttgtcacagtttccttctaatttcttctacgaaggtagtctacagaatggagtttgcgcc
gacgaacgtaagctgaaggtagacttcccttggccttcaccggatacgccgatgttcttc
ctggtgacccaaggacaagaggaaattgcaggatccggcacgtcgtatctgaatcgtacc
gaagcatcgaacgtggagaaaataacgacccgctttttaaaggctggagtaaaaccggat
cagattggtatcataacaccgtacgagggacagcgggcgtacttggtgcagtatatgcag
tatcagggatctttgcactccaagctataccaggagattgaaattgctagcgtagacgca
ttccaaggtcgagaaaaggatatcataatcatgtcctgtgtccgttccaatgaacatcaa
ggaatcggtttcctgaatgatccgagacgtcttaatgtggctctgactcgtgccaaatat
gggattatcatcgtaggaaacccaaaggtattatccaagcagcaattgtggaaccatctt
ttgaatttctacaaagacaagaaagtgttggtagaaggatctttgaataatctaaaggag
tcgatgattcagtttacgaaaccaaaaaagattgtcaacactctaaatcctggatcgcac
tttatgaacaacgttatgtacgatgctaaggaagctggctatttcgaacgcggccatggt
tctggcttttccagtagcactttcggtaatccaggtccaatcggaagcatgatgaatgga
ccccgcaatcaacctctggatgtgttttccagaactcatgatcccatcagttacatctca
ccggatcgtgtccaagcagccatgaataatatgcccattccggttggaatgttcatgaat
atgccaaatgttcaaccccgctacttccagcagcaacaagcagttcaggcagctaagcaa
gctcgtcgcatcaaacctggtgtcatcggaagcaaacccaaaccgcgccccattggacca
ccatccagtcagatcaacacttctggagcgattggaacgggttcactgacccagggcatg
tcccaaaacatgtcccagcctggatttagtctctcgcaacaaccggacttctcgcaggat
tacatggccgaataccagtcccaagtggatggactgttgtcgcaggagtccacatttgga
cccagccaatcggctgtagagcgtttggcattcgacctaccgccaaatcagttctcgcag
ccgtattga
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integrated database retrieval system
