Aedes albopictus (Asian tiger mosquito): 109410438
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Entry
109410438 CDS
T06060
Name
(RefSeq) putative U5 small nuclear ribonucleoprotein 200 kDa helicase
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109410438
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalb03041
]
109410438
Enzymes [BR:
aalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109410438
Spliceosome [BR:
aalb03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
109410438
Complex C
U5 SnRNP specific factors
109410438
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec63
WHD_SNRNP200
DEAD
Helicase_PWI
ResIII
Helicase_C
BRR2_plug
AAA_30
AAA_22
HTH_61
AAA_19
SWI2_SNF2
PhoH
nSTAND3
DEXQc_Suv3
Motif
Other DBs
NCBI-GeneID:
109410438
NCBI-ProteinID:
XP_029725942
LinkDB
All DBs
Position
Unknown
AA seq
2143 aa
AA seq
DB search
MADAAARQLQYEYKANSNLVLQADVRLIERPRRDEATGEVLSLVGKLEGTRMGDRAQRTK
PEKTEERKAKRQKRDEAQYDFNSMKGATLLTEGIDEMVGIVYRPKTQETRQTYEVLLSFI
QEAIGDQPRDILCGAADEILAVLKNDKLKDRERKREIDGLLGTVTDERFALLVNLGKKIT
DFGADASSSGGATGVTEGEQIDDTYGINVQFYESEEESDEDKYGEIRDDDVQDEGEEARD
DGILHAENLGGNEESKKEKALDPRDIDAHWLQRCLRKYYNDSIMSQAKAGEVLGVLKDAG
DDRECENQLVLLLGYDCFDFIKLLKKNRQTILYCTMLASSQSESERVKIREKMKGDAFLA
KILRQLDTGKQEMDDYESEKSKMQRRRKEQDDDNMEGIGGQIPGNRNVLELDELAFTQGS
HLMANKRCQLPDGSFRKQRKGYEEVHVPALKPKPFDEEEELMVIDKLPKYVQPVFAGFKT
LNRIQSRLYKTALESDENLLLCAPTGAGKTNVALLTMMREIGKHINDDGTINVDEFKIIY
IAPMRSLVQEMVGNFGKRLATYNLTVSELTGDHQLSREQIAATQVIVCTPEKWDIITRKG
GEKTYTQLVRLVIIDEIHLLHDERGPVLESLVARTIRNIETTQEDVRLVGLSATLPNYHD
VATFLRVRPETGLFYFDNSFRPVALEQQYIGVTEKKALKRFQVMNDIVYEKVMEHAGKNQ
VLVFVHSRKETGKTARAIRDMCLEKDTLGNFLREGSASMEVLRSEADQVKNAELKDLLPY
GFAIHHAGMTRVDRTLVEDLFADRHIQVLVSTATLAWGVNLPAHTVIIKGTQIYNPEKGR
WVELSALDVLQMLGRAGRPQYDTKGEGILITNHSELQYYLSLLNQQLPIESQLVSKMPDM
LNAEIVLGTIQNVKDAVTWLGYTYLYIRMLRQPTLYGVSYDAIKEDPLLEHFRADLVHTA
ALHLEKSGLIKYDRKSGHFQVTEIGRIASHYYCTHETMLTYNQLLKPTLSEIELFRVFSL
SGEFRNITVREEEKLELQKLMERVPIPIKESMEEPSAKVNVLLQAYISQLKLEGFALMAD
MVYVTQSAARLLRAIFEIVLHREWAQLADKCLTLCKMIDRRMWQSMSPLRQFRKMPEEIV
KKIEKKNFPWERLYDLEANEIGELIRVPKLGKTIYKYVHQFPKLELSTHIQPITRSTLRV
ELTITPDFQWDEKIHGQSEAFWILVEDVDSEVILHHEYFLLKAKYCQDDHLVKFFVPVFE
PLPPQYFLRIVSDRWIGAETQLPVSFRHLILPEKNLPPTELLDLQPLPISALREPNFEGL
YMDKFPQFNPIQTQVFNAVYNSEDNVFVGAPTGSGKTTIAEFAVLRMLQQNPHGRVVYLV
SRDSLAELVFMDWHQKFGQHLGCKVVKLTGETGTDLKLIAKGQIIVTTADKWDILSRRWK
QRKNVQNIQLFIVDELQLIGGEEGPVLEVVCSRMRYISSQIEKQIRIIALSASLSDARDV
AQWLGCNANATFNFHPSVRPVPLELHVQGFNITHNASRVAAMSKPVYNAITKFSPHKPVI
VFVSSRKLARLTAIDILTYCAAEAQPNRFFHAEEEDIKPFLDRMTDKTLKETLSQGVAYI
HEGLTPSDHRIVEQLFDSGAVQIAVVTRDLCWGLNISAYLVVIMDTQFYNGKSHSYDDYP
VTDVMQMVGRANRPLEDDDAKCVLMCQSSKKDFFKKFLNESLPVESHLDHRLHDHFNAEI
VTKTIENKQDAVDYLTWTFLYRRLTQNPNYYNLQGVTHRHLSDHLSELVEGTLSDLEQSK
CISVEDEMDTLPLNLGMIAAYYYINYTTIELFSLSLNSKTKIRGLLEIISSAAEYEDVVV
RHHEDNILKSLAQRLPNKLTGPNGTAPKYNDPHIKTNLLLQAHLSRLQLGAELQGDTEQS
LGKAIRLIQACVDVLSSNGWLSPAVAAMELAQMVTQAMWSKDSYLKQLPHFNADIIKRCQ
EKKIETVFDIMELDDEDRIRLLQLNDQQMSDVARFCNRYPNIEMTFEVVDNDRIHSGSSV
NVVVNLEREDDVTGPVIAPFFPQKREEGWWIVIGDPKTNSLLSIKRLTLQQKAKFKLDFV
APSPGHHDYTLYFMSDSYLGCDQEYTFSINVGDFQSESESESD
NT seq
6432 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgcagcggcacgtcagctgcagtacgagtacaaagcgaactcgaatttggtt
ttgcaagcggatgtccgtctgatcgagaggccacgtcgagatgaagctaccggcgaggtg
ctgtcgctggttggaaagctggagggcacgagaatgggagatcgggcacagcgaaccaaa
ccggagaagaccgaggagcggaaggcaaaacgccaaaagcgtgacgaagcgcagtacgac
ttcaacagcatgaagggtgccaccctgctgacggagggaattgacgagatggtcggcata
gtgtaccgcccgaaaacgcaggaaacccgtcagacgtacgaggtgttgctcagcttcatc
caggaggccatcggcgatcagccgagggacatcctgtgcggtgcggccgatgagattttg
gccgtgctgaagaacgacaagctgaaggatcgggaacgaaagcgggagattgacgggctg
ttggggacggtgacggacgagcggtttgctctgttggttaaccttggtaagaagattacc
gacttcggggcggatgcgtcgtcgtcgggtggagcgacgggagtgaccgagggcgagcag
attgacgatacctacgggatcaatgtgcagttctacgagtcggaggaggagagcgacgag
gacaagtacggagagattcgagatgacgatgtgcaggatgagggcgaggaggcccgggac
gatggcattttgcacgctgagaatctcggcggcaacgaggagagcaagaaggagaaggct
ctggaccctcgggacatcgacgcccattggttgcagcgttgtttgcgaaagtactacaac
gattcgattatgtcgcaggccaaggccggcgaagtgctcggtgtcctcaaggatgccggc
gatgatcgggagtgtgagaatcaactggtgctgttactcgggtacgactgtttcgatttc
atcaagctgctgaagaagaaccgtcagacgattttgtactgtacaatgctggcttcgtca
cagagcgagagcgagcgggttaagatccgggagaagatgaagggggatgcgttcttggcg
aagatcttgcggcagttggataccgggaagcaggagatggatgactacgagagcgagaag
tccaagatgcagaggaggagaaaggaacaggatgatgacaatatggagggtattggagga
cagattccggggaacaggaatgtactggagctggacgagttggcgtttacgcagggatcg
catctgatggcaaataagcgttgtcagctgccggacggaagtttccgtaagcaacggaag
gggtacgaggaagttcacgttccggcattgaagccgaaaccatttgacgaggaggaagag
ctgatggtgatcgataagttgcccaagtacgtccagccggtgttcgccgggttcaaaacg
ctgaaccggatccagagccggctgtacaagacggcactggaaagcgacgagaatctgctg
ctgtgtgccccgacgggagccggtaagaccaacgtggccctgctgactatgatgcgagag
atcgggaagcacatcaacgacgatggaacgatcaacgtggatgagttcaagatcatctac
attgctccgatgcgatcgctggtacaggaaatggtgggaaacttcgggaagcgcctggct
acgtacaacctgacggtatcggaactgacgggtgatcatcagttgagtcgggaacagatc
gcggccacgcaagtgatcgtttgtactccggagaagtgggacatcatcacccgaaaagga
ggcgagaagacctacacccaactggtccgcctggtgatcatcgatgaaatccatctgctc
cacgacgaacgtggtccggttctggaatcgttggttgctcgtacaatccggaacatcgaa
accacacaagaggacgtccgtttggtaggcttatctgctaccctgcccaactaccacgac
gtagcgaccttcctgcgcgttcgcccggaaaccggcttgttctacttcgacaacagcttc
cgtcctgtcgccctggagcagcagtacatcggagttaccgagaagaaagccctgaagcgg
ttccaggtcatgaatgacatcgtctacgaaaaggtcatggagcacgccgggaagaaccag
gtcctggtatttgtccactctcgcaaggaaaccggtaaaactgctcgtgccattcgggac
atgtgtctggagaaggacaccctggggaatttccttcgggagggttcagcgagtatggaa
gtcttacgatcggaagctgatcaggtcaaaaacgctgaacttaaagatctgctcccgtac
ggcttcgcgatccatcacgccggtatgacgcgcgttgacagaactctggtcgaagatctg
ttcgccgatcgtcacatccaagtcttagtctctaccgccaccctggcctggggtgtcaac
ttgccggcccacaccgtcatcatcaagggaactcagatctacaaccccgagaagggccgt
tgggtcgaactgagtgctctggacgtccttcagatgctgggtcgtgccggacgacctcag
tacgataccaaaggtgaaggtatcctgatcaccaaccacagcgaactccagtactacctt
tctttgctaaatcaacagctcccgatcgagtcccaactggtttccaagatgcccgacatg
ctcaacgccgaaatagtgctcggaacgatccagaacgtcaaggacgctgtaacttggctc
ggatatacctatctctacatccggatgctccgtcaacccactctctacggcgtctcctat
gatgccatcaaggaagaccccctgttggagcacttccgtgccgatttggtacacactgca
gccctgcacctggagaagagcggcttgatcaagtacgatcgcaagagtggccacttccag
gtcaccgagatcggtcgcatcgcctctcactactactgtacccacgagaccatgttgacc
tacaatcaactcctcaaacccactctcagcgagatcgaactgttccgggtattctcccta
tccggtgagttccgaaacatcaccgtccgcgaagaggaaaaactggaacttcaaaaactc
atggagcgcgtccccatcccgatcaaggaaagcatggaggaacccagcgccaaggtcaac
gtactcctccaagcgtacatctcccaactcaagctggaaggttttgccctgatggccgat
atggtttacgtaacccaatcggcggcgcgtctcctgcgcgccatcttcgagatcgtcctt
catcgcgagtgggcccaactcgccgacaaatgtctcaccctgtgcaagatgatcgatcgt
cgcatgtggcagagtatgtccccgctgcgtcagttccgcaagatgcccgaagagatcgtc
aagaagatcgagaagaagaatttcccctgggagcgtctgtacgacctggaggccaacgag
atcggtgagttgatccgcgtccccaagcttggcaaaacgatctacaagtacgtgcaccag
ttcccgaagctcgaactgtccacccacatccaaccgatcacgagatctacgcttcgggtt
gaacttacgatcaccccggatttccagtgggacgaaaagattcacggtcaatcggaagcg
ttctggatcctggtcgaagacgtcgactcggaagtgatcctccaccacgagtacttcctg
ctgaaggccaagtactgccaggacgatcacctggtcaagttcttcgttccggtgtttgaa
ccgctgcccccgcaatacttcctgaggatcgtgtccgatcgttggatcggcgcagaaacg
caacttccggtgtcgttccgtcatctgatcctgccggagaagaacctcccaccgacggag
ctactcgatctgcagccactgccgatcagtgctcttcgggaaccgaactttgaagggtta
tatatggacaagttcccacagttcaacccgatccagacccaggtgttcaacgccgtctac
aacagcgaggacaatgtgtttgtcggagctccgaccggatccggtaagaccacgatcgcg
gagttcgccgttctcagaatgctgcagcagaacccccacggaagggttgtttacctggtg
tcccgggatagtctcgccgaattggtcttcatggattggcatcagaagtttggacagcat
ctgggctgcaaggtcgtcaagctgaccggtgaaaccggcacggacttgaagctgatcgcc
aagggacagatcatcgttacgacggcggacaagtgggatattctttcgcgtcgatggaag
caaaggaagaacgtccaaaacatccagctgttcatcgttgatgaactgcagttaatcgga
ggagaagagggtccagttctggaagtcgtgtgctcccgtatgcgctacatctcgtctcag
atcgagaagcagatcaggatcatcgctctttcggcgtcgctctcggacgcgagggacgtt
gcccaatggttgggctgtaacgcgaacgcgaccttcaatttccatccgagtgttcgtccg
gtcccgctggagttgcacgttcaaggattcaacataactcacaacgcttcgagggtggcg
gccatgtccaagccggtctacaacgcgatcaccaagttcagtccgcacaaaccggtgatc
gtgtttgtttcgtcgcgcaaactggcccgtctcacagcaattgatatcctgacgtactgc
gcagcggaagctcaaccgaaccggttcttccacgccgaagaggaagacatcaaacctttc
ctcgatcgtatgaccgacaagaccctcaaggaaaccctctcgcagggtgttgcctacatc
cacgaaggcttgacgccgtcagatcaccgcattgtcgaacagctgttcgactccggggcc
gttcagatcgcggtcgtcacccgggacctctgctggggtctgaacatctccgcctatctg
gtggtgatcatggacacccagttctacaacggcaagagccattcctacgatgactatccg
gtcacggacgttatgcagatggtcggtcgggccaatcgccctctggaggacgacgacgcc
aagtgcgtcctgatgtgccagagctccaagaaagacttcttcaagaagttcctcaacgaa
agtctcccagtggaaagccatctcgatcaccgactacacgatcacttcaacgcagaaatt
gtcaccaaaaccatcgagaacaaacaggacgccgtagattatcttacctggacgttcctg
taccggcggttgacccagaacccgaactactacaacctccaaggggtaacccatcgtcac
ctctccgatcacctttcggaactcgtcgaaggcaccctgtccgatctggagcagtccaag
tgcatcagcgtggaggacgaaatggacacactcccactgaatctgggcatgatcgcggca
tactactacatcaactacaccaccatcgaactgttcagcttgtcgctgaacagcaagacc
aagatccgcggactgctggagatcatctcgtcggcggccgaatacgaagacgttgtggtg
cgacaccacgaggacaacattctgaagagtttggcccagaggttgccgaacaagctaacc
ggacccaacggaaccgctcccaaatacaacgaccctcacatcaagaccaacctgctgctt
caggcccatctgtcgcgtctccagctgggtgccgagctgcaaggtgacaccgaacaaagc
ctcggaaaagcgatccgcctcatccaggcttgcgtcgatgtcctctcctccaatggatgg
ctctcgcctgccgtcgcagccatggaactggcccagatggtcacccaggcgatgtggagc
aaagactcctacctgaaacagctaccgcacttcaacgccgatatcatcaaacggtgccag
gagaagaaaatcgaaaccgtgttcgacatcatggagctggacgacgaagaccggatccgg
ttgctacagctgaacgaccagcagatgtccgacgtggcccggttctgcaaccgctatccg
aacattgaaatgaccttcgaggtggtggacaatgatcgtatccattccggctcgtcggtc
aatgtcgtggtcaatctggaacgagaggatgatgtgaccggaccggtgattgcaccattc
ttcccgcagaaacgcgaagaaggctggtggatcgtcatcggggatccgaaaaccaactcg
ctcctgtcgatcaaacggctcaccctgcagcagaaggccaagttcaagctggactttgtg
gcgcccagcccgggccatcacgactacacgctgtactttatgagcgattcctatctgggc
tgcgaccaggagtacacctttagcatcaacgtgggcgacttccagtccgagtcggagagt
gagtccgactaa
DBGET
integrated database retrieval system
