Aedes albopictus (Asian tiger mosquito): 109418078
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Entry
109418078 CDS
T06060
Name
(RefSeq) poly(A)-specific ribonuclease PARN-like isoform X1
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109418078
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109418078
Enzymes [BR:
aalb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109418078
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
109418078
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_1
Motif
Other DBs
NCBI-GeneID:
109418078
NCBI-ProteinID:
XP_029726685
LinkDB
All DBs
Position
Unknown
AA seq
587 aa
AA seq
DB search
MEITTKNFIEQLPAIRQTIREASFFAIDTEFTGLTSDRNVMPFDTPEEVYLKTIENSAHF
VIIQFGLCAFQVHPESGQVSYKCFNFYCYPKGRVPVFACQGESMRFLADNGFDFNKLFRE
GLSYCGEVDEERLRTELKDRQDQRAATLEAKAEENGNNDSLNMVPVPPEEEKLIGEISVR
IEEFLKSEDKDYTITNCNGFQRKLIYQMIDSQFRKTISTSSVTLENNHKAILVERKRSKQ
EELKLEQERVAQENEDLERMVGLSLVLQELSQARKLIIGHNMLLDLLFIIRQFFRPLPHS
YQDFKKTMRELFPLILDTKYLCTNGELKVHIYSSVLAHVFEAVNKAPFIMPDVTCGFEEH
KYSADDTKHHDAGYDAYLTGMCFLGLASFFKADLKDITHDPVLKAYFNRIFLLRVSEINY
IYTHGKEPSFSREHVFFVSFPESWRQSDIVNRFRNYGQVHVNWVNSSSAFVTLHNRDYAS
HVIKTIDKASISICTLTQFKAKQQLAGVKRRHDSDSADHGHHQQHQQHHHPHHSHHHHAH
HKGKAEKEEKSPSVVPPQVSAEEVAAFGAASQPKKAKKGPFAEDDNW
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atggaaattacaaccaaaaatttcattgagcagctgccggcgattcgtcaaaccatccgg
gaggcaagcttcttcgccatcgatacggaattcaccggtttgacgtcggatcggaacgtc
atgccgttcgatacaccggaggaggtgtatctgaagacgatcgaaaattcggcacatttc
gttatcattcagtttgggttgtgtgcgttccaggttcacccggaaagtggacaggttagc
tacaaatgcttcaacttctattgctatccgaaggggcgcgtacctgtgttcgcctgccaa
ggggagagtatgcgcttcctggcggataacgggttcgatttcaacaagctattcagggag
ggattgtcctactgtggcgaagtggacgaggagcggctgaggacggagttaaaggataga
caagatcaacgggccgcaacgttagaagcaaaagcagaagagaatggcaataacgattca
ctgaacatggttcccgtacctccggaggaggaaaagttgataggggaaataagcgtgcga
attgaagagtttctcaaatcggaggataaggactacactataaccaactgcaacgggttc
cagcggaagttgatataccagatgatcgactcacagtttagaaaaactatctccacttcc
tcggtgaccctggagaataaccacaaagccattctggtggaacgcaaacgctcaaagcaa
gaggaactaaaactggagcaggaacgggtggctcaggaaaacgaggacctggaacgtatg
gtggggctttcgcttgttctgcaggaattgtcccaggcgagaaagttgatcattggtcac
aacatgctgctggacttgctattcatcatacgacagttcttccgtccactgccacatagc
tatcaggacttcaagaagacaatgcgggagttgtttccacttatcctggacaccaagtac
ctgtgcacaaacggagaacttaaagtgcacatctactcgtcggtgttggctcacgtattt
gaagcggttaataaggcgcccttcattatgccggatgttacctgtggattcgaggagcat
aagtattctgccgatgacacgaaacatcacgatgccggttacgatgcgtatctcaccggc
atgtgcttcctgggattggccagtttcttcaaggcggacctgaaggacatcacacacgat
ccggtattgaaggcctattttaacagaatatttttgctgcgagtttccgaaataaactac
atctacacacatgggaaagaaccatccttctcgcgagagcacgttttcttcgtgtccttc
ccggagagttggcgtcagagcgacatcgtgaaccgttttcgcaactatggtcaagtgcac
gtgaactgggtcaacagcagttcggcgttcgttaccttgcacaatcgtgactatgccagt
cacgtgatcaaaaccatcgacaaagctagcatctccatctgtactttgacccagttcaaa
gccaagcagcaattggctggggttaaaagaaggcacgatagtgatagtgccgatcatgga
caccaccagcaacatcagcagcaccatcatccccaccactcccaccatcatcacgcccac
cacaaaggaaaagcggaaaaagaagaaaaatcgccatcggtagtgccgcctcaggtttcc
gccgaggaggtggctgcctttggggccgccagtcaaccgaaaaaggccaagaaaggaccc
ttcgctgaggacgacaactggtga
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