Aedes albopictus (Asian tiger mosquito): 109424554
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Entry
109424554 CDS
T06060
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109424554
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aalb03041
]
109424554
03009 Ribosome biogenesis [BR:
aalb03009
]
109424554
Enzymes [BR:
aalb01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
109424554
Spliceosome [BR:
aalb03041
]
Complex A
U2 snRNP components
U2 related factors
109424554
Complex B
109424554
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
109424554
Ribosome biogenesis [BR:
aalb03009
]
Eukaryotic type
90S particles
Helicases
109424554
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
AAA_30
ResIII
AAA_25
ABC_tran
AAA_7
T2SSE
TsaE
TrwB_AAD_bind
Motif
Other DBs
NCBI-GeneID:
109424554
NCBI-ProteinID:
XP_029734038
LinkDB
All DBs
Position
Unknown
AA seq
726 aa
AA seq
DB search
MSKRRIEVMDPFIKKRREEKGMLDSGASTSGSSNMVPTGTAASNGKTNPMNGIPYTQNYF
NLYKKRITLPVFEYRADFMRLLSEHQCIVLVGETGSGKTTQIPQWCVEFARASGNKAVAC
TQPRRVAAMSVAQRVSEEMDVMLGQEVGYSIRFEDCSSARTVLKYMTDGMLLREGMSDPM
LETYQVILLDEAHERTLATDLLMGVLKEVIRQRKDLKLVIMSATLDAGKFQQYFDNAPLM
NVPGRTHPVEIFYTPEPERDYLEAAIRTVIQIHMCEDVEGDILMFLTGQEEIEEACKRVK
REIDNLGPEVGELKCIPLYSSLPPNMQQKIFEAAPPKKANGAIGRKVVISTNIAETSLTI
DGVVFVIDPGFSKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAY
KTEMQDNTYPEILRSNLGTVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALD
DDGNLTDLGAVMAEFPLDPQLAKMLIASCQHNCSNEILSITAMLSVPQCFVRPNELKKAA
DDAKKRFAHLDGDHLTLLNVYHAFKQNNEDPSWCYDNFINFRSLKSADNVRQQLARIMDR
FNLKRTSTDFNTTNYYFNIRKALVEGFFMQVAYLEQTKHYVTIKDNQIVQLHPSTCLGHR
PNWVMYNEFVLTTKNYIRTVTDVKPEWLLTIAPQYYDLNNFPECEAKRQLEFINTKLESK
QYQQGF
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaaaggcgaatcgaagtgatggatccctttatcaagaaacgaagggaggaaaag
ggtatgctcgattccggagcgtcgaccagcggcagcagcaatatggttccgaccggtaca
gccgcgtccaatgggaaaactaacccaatgaatggaatcccgtacacgcagaactacttt
aacctgtacaaaaagcgtatcaccctgccggtgttcgagtatcgagcggattttatgcgg
ctgctgtcggagcaccagtgcatcgtgctggtcggtgaaactggttccggaaaaacaacc
cagattccccagtggtgtgtggaatttgccagagccagtggaaacaaagcagtggcctgt
acgcagcctcggcgagtggccgcaatgtccgtcgctcagcgagtttcggaggaaatggat
gtcatgctgggacaggaagttggctacagtatccgttttgaggattgctcctcggcgaga
accgttctcaagtatatgaccgatggtatgttgcttcgagaaggaatgagtgacccaatg
ctggaaacctatcaggttattctactggacgaggctcacgaacgtaccttggcgacagat
ttacttatgggtgtcctcaaggaagtgattcgtcaacgaaaagatctgaaactcgttatt
atgtccgctactctggatgcaggcaagttccagcagtacttcgacaacgcaccgctgatg
aatgttccgggtcgaactcatccggtcgaaattttctacactccggaaccggagagggac
tatctggaagcggccatccgcaccgtcattcagattcacatgtgcgaagacgtcgaaggg
gacattctgatgttcctcaccggtcaggaagagattgaggaagcatgcaaacgtgtgaag
cgcgaaatcgacaatcttggaccggaagtgggcgaactgaagtgcattccactgtactct
tcactgccacccaacatgcagcagaagattttcgaagcggctccgccgaaaaaggccaac
ggagccattgggcggaaggtggtcatctccaccaacattgccgaaacgtcactcaccatc
gatggagtggtgttcgtgattgatccgggattctccaagcaaaaggtctacaatccgcga
atccgcgtggaaagtttactggtttctccgatcagtaaggcttcggcacagcagcgcgcc
ggtcgtgcaggtcgtaccaggcccggaaaatgtttccggctgtacaccgaaaaggcatac
aaaacggaaatgcaggataacacgtatcctgaaattttgagatccaatttaggaactgtt
gtcttacaactgaaaaaacttggcatcgatgatttggtgcatttcgacttcatggatccg
ccggctccggaaacactgatgcgagcactggagctgctcaactacttggccgccctggac
gacgacggtaacctgacggacttgggagcagttatggcagaatttcccctggatccccaa
ctggcaaagatgttgatcgctagctgccagcacaactgctcgaacgagatcctctcaatt
acagctatgctgtcggtcccgcagtgtttcgtgcgcccgaacgagctcaaaaaggccgcc
gatgatgccaagaagcgctttgcccatctcgacggtgaccatttgacacttttgaacgtg
taccacgccttcaaacagaacaacgaagacccgagctggtgttatgataactttatcaac
ttccgttcgcttaaatcggccgacaatgtgcgccagcagttggctcggataatggatcgg
ttcaacttgaaacgtacaagcacagacttcaacacgaccaactactatttcaacattcgg
aaagctctggttgaaggattcttcatgcaggtagcttacttggagcaaacgaagcactac
gtgacgatcaaggataaccaaatagtgcaactgcatccatcaacctgtttgggtcacaga
ccgaattgggtcatgtacaacgaatttgtgctgaccaccaaaaattacattcggacagtg
acggacgtaaagccggaatggttactgacgattgcaccacaatactatgatttgaacaac
ttcccagagtgcgaggccaagcgccaactggagttcataaacacgaaactagaatcaaag
cagtatcagcaaggattttag
DBGET
integrated database retrieval system
