Aedes albopictus (Asian tiger mosquito): 109425847
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Entry
109425847 CDS
T06060
Name
(RefSeq) PAN2-PAN3 deadenylation complex catalytic subunit PAN2-like
KO
K12571
PAB-dependent poly(A)-specific ribonuclease subunit 2 [EC:
3.1.13.4
]
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109425847
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109425847
Enzymes [BR:
aalb01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
109425847
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109425847
mRNA degradation factors
3'-5' decay
Pan complex
109425847
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UCH_1
PAN2_N
RNase_T
UCH
zf-CCCH_2
WD40_CDC20-Fz
Motif
Other DBs
NCBI-GeneID:
109425847
NCBI-ProteinID:
XP_019556765
LinkDB
All DBs
Position
Unknown
AA seq
1289 aa
AA seq
DB search
MDYVYMSGDPVNRAEDIITLTMYDNGPPAGDYPEGDYGPFNIGFGEPEYMEHGMVLADGG
DRFGVSTVSFDTQEELIWMGNQGGHVTSYYGGTMQKYTSFQVHANEIVRQIHTIDAGILA
LTSTTLRHQIRRGIPKFTFRSEKMVDMVCMVEHQPNRLLMGGHQTELIDFDMATYQEVGS
VPAGQNGCAILRNHSRYLCEGDPFGTILLRDPNSLSIEHELTTHAGSLSDFDVQGNYLVS
CGYSGRQGNLVIDRFLMVHDMRMLRLVSPIQVLVEPQLLKFLPSPCSRLAVVSPLGQLQL
VDTVELSEPRVQMFQINTTGSQCLTFDICSSNQAMAFGDQSGHINLIAAVKINTPSLQFN
PYSRETEFADTVEPLPMISITDKNFPLSSILLPPLTTGDRWLSDWPAFMNTYDYLKPKPI
RPEITATMKMQGPIGYAPNPKTSLRNQIPYIMDKNSSSSQCSTPVSSSQKGTGEQGLKLV
PRRYRKVEVKYSKLGVQDFDFEQYNQTGFVGLEANLPNAYCNAMLQALYFIVPLRKAILS
HCCSKEFCLACELGFLFHMLDVGTCSQPCQASNFLRSFRTVPEAAALGLILSSDRSNNAS
INLVSLIQNWNRFILHQIHYELLEAIKKNENMMPVSEPLVGVGRRMQLSASPRPFIPGAE
MHVQAPEDYHQEALDNEVQQYGSNNEKFQFLEASSDYDTTLIPECEPYPDPAEQMPPSSK
NYNKDETEISRLFGTQQKTTQRCLKCNAERVKNNILLVCNLLYPVNANNRNMDGTFALIL
KNSLSVEKTTPAWCEKCNKFTPTNQKSRVTDLPEILSINCGLETDKELEYLKKQMCRPSA
QVGGTSTSESEPRAANTGNGKMCRYGMNCSRVDCHFSHPRKSSPAVIISSAPSPAQQKSW
FPLSFRMSLDEKENLEIGSLKSASSCSEISEDTNLREDKLFRKSKRYSLSAAVCYINDGA
QRNLVALIHVPKGYHDLKQNRTGEIPGSSAGIDFTDGSWYIFNDFSISPVSVQEAVWFTL
DWKVPCVLFYTSTSLRDEVGDNKEYLTQYVNPFTNDLFMETSPTVEDKNFKPLAQEEIFQ
SGDLVAMDAEFVTLNPEESEIRSDGKLSTVKPSHMSVARITCIRGQGPDEGVPFVDDYIS
TQEQVVDYLTKFSGIKPGDLDANFSNKRLTTLKNSYQKLRYLVDSGVIFVGHGLKNDFRV
INIIVPPEQIVDTVYLFHLPHHRMVSLRFLAWQFLGIKIQSETHDSVEDARTALLLYKHY
LKLHTKEEFTMALSNLYETGKKLQWKVPD
NT seq
3870 nt
NT seq
+upstream
nt +downstream
nt
atggattacgtgtacatgagtggcgatccggtcaaccgagccgaggacatcattaccctg
acgatgtacgacaacggtccaccggcgggagactacccggaaggggactatggaccgttc
aacattggattcggcgagccggagtacatggaacacgggatggtgctggccgatggaggg
gatcgcttcggggtgtcgacggtttcgttcgacacgcaggaggagttgatctggatgggg
aaccagggcggacatgtgacgtcctactacggggggacgatgcagaagtacacatccttc
caggtgcacgccaatgagatcgtccggcagatccatacgatcgacgcgggaatactggct
ttgaccagcacgacgctacggcaccagattcggaggggaattcccaaattcacgttccgg
tcggagaagatggtcgatatggtgtgcatggtggaacatcagcctaatcggcttttgatg
ggaggtcatcaaaccgagttgatagattttgatatggccacttatcaggaggtgggaagt
gttcctgccggacaaaatgggtgcgccattttgcggaatcattctcgctacctctgtgaa
ggggatccttttggtacgattctacttcgagatcccaacagcttgtcgattgaacacgaa
ctaacaacccacgctggaagtctgtcggactttgatgtacaaggaaattacttggtttct
tgtggttatagcggaagacaagggaacctggtaatagatcgcttcttgatggttcacgac
atgagaatgttgagattagtgtcgccaattcaggtgttagttgagcctcaattattgaaa
ttccttccatctccttgctctcgcttggcagtggtgtcaccgctaggacaactccagttg
gttgataccgtagaactcagcgaacctcgtgttcaaatgttccagatcaatacgaccgga
tctcagtgtctcaccttcgacatttgctcttcaaatcaagcgatggcattcggggatcaa
tccggacacattaaccttattgccgctgtcaaaatcaatactccctcacttcagttcaat
ccttactcaagagaaacggaattcgccgataccgtcgagccactaccgatgatctcgatc
accgataagaactttcctctgtcatcgattcttcttccaccgcttacgaccggcgatcgt
tggcttagtgattggccagcttttatgaacacctacgactacctcaaaccgaagccaatt
cgtccggaaatcaccgccaccatgaaaatgcaaggcccgattggatacgcccctaatccg
aagacctccttacgcaatcaaattccctacataatggacaaaaactcatcgtcaagccag
tgctccactccggtcagcagctcgcagaagggaaccggagagcaaggattgaagcttgtc
ccccgccgttatcgcaaggtcgaggtcaaatacagcaaactgggcgtccaggacttcgac
ttcgaacagtacaaccagacaggattcgtcggattggaagctaacctcccgaatgcgtat
tgtaacgcaatgctacaggccctctacttcattgtcccactccgtaaggccatcctatcc
cactgctgttcaaaagaattctgcctggcctgtgagcttggttttctgtttcacatgctg
gacgtcggaacatgcagccagccctgccaggcgagcaactttctccgctcgtttcgaacc
gtcccggaggcggcggccctcgggttgatcctttcctccgatcggagcaacaatgccagc
atcaatctggtcagtctgatccagaactggaaccgattcatcctgcaccagatccactac
gaactgctggaggcgatcaagaagaacgagaacatgatgccggtcagtgaaccgctggtc
ggagtgggccggcggatgcaattgtcggcttcaccgcgaccatttatcccgggggccgaa
atgcacgtgcaagccccggaggattaccatcaggaggcgttggataacgaggtgcagcag
tacggatccaacaatgagaagttccagttcttggaagctagcagcgattacgacacgacg
ctgatcccggaatgtgaaccatatccggatccggcagagcaaatgccaccatccagcaaa
aactacaacaaggacgaaacggaaatcagccgtctgtttggaacgcagcagaagacaacc
caacgctgcctgaagtgcaacgccgaacgagtcaagaacaacattctgctcgtttgcaat
ctgctctatccggtcaacgcgaacaatcgcaacatggatggcacctttgcgttgattctg
aaaaactccctcagcgtcgagaagaccactccggcgtggtgcgaaaagtgcaacaaattt
acacccaccaatcagaagagtcgcgtgacggatctgccggaaatcctgtccatcaactgc
gggctggaaacggacaaggagctggagtatctcaaaaagcagatgtgtcgcccttcggcc
caagtgggagggacgtccacgtcggaaagtgaaccgcgcgcggccaacaccggcaacggg
aagatgtgccggtatgggatgaactgctcgcgggtcgattgccacttttcacatcctagg
aaatcatctccggcggtcattatctcgagtgcaccatcgccagcccagcaaaaatcctgg
ttcccgttgagcttccgcatgagcctggatgagaaggaaaatctagaaattggctcactc
aagagcgcttccagctgtagcgaaatcagcgaggatacgaatcttcgagaagacaaacta
ttccgcaaatcaaagcggtacagcctctcggccgcagtatgctacatcaacgacggagct
cagcgtaatctcgtcgcactgatccatgttccgaaagggtaccacgatctgaaacagaac
cgcacgggagaaatccctggatcatccgccgggatcgatttcaccgacggaagctggtac
atcttcaacgactttagcatttcgccggtgtccgtacaggaggcggtttggttcaccctg
gactggaaggttccctgtgtgctgttctacacgagtacttctctgcgggacgaggtgggt
gacaacaaggaatatctgactcagtacgtgaatccctttacgaacgacctgttcatggaa
acgagccccacagtggaagataagaattttaaaccacttgcacaggaggagatattccag
tcgggagacctcgtagcaatggatgctgaattcgtcactctaaatccggaagaaagcgaa
atccgctcggacggaaaactgtccaccgtcaaaccaagtcacatgagtgtcgctcgtatc
acttgcatccgcggacaaggccccgacgaaggggttcccttcgtcgacgattacatttcc
acacaggaacaggtagtcgattacctaaccaaattctccggtatcaaacccggcgatctg
gatgccaacttcagcaacaaacgtctgaccactctgaaaaactcctaccaaaaactgcgc
tacctggtcgacagtggggtgatcttcgttggccacggtctgaaaaacgacttccgcgta
atcaacatcatcgtcccgccggaacagatcgtggacacggtgtacctgttccatctgccc
caccaccggatggtatcgctgcgcttcctggcgtggcaatttctcggcataaaaatccaa
tccgaaacgcacgactcggtcgaggacgcccggacagcgctgctactctacaaacactac
ctaaagctgcacaccaaggaagagtttaccatggcactgtccaatctgtacgaaacgggc
aagaagttgcagtggaaggtcccagactag
DBGET
integrated database retrieval system
