Aedes albopictus (Asian tiger mosquito): 109432314
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Entry
109432314 CDS
T06060
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aalb
Aedes albopictus (Asian tiger mosquito)
Pathway
aalb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aalb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109432314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aalb03019
]
109432314
03041 Spliceosome [BR:
aalb03041
]
109432314
Messenger RNA biogenesis [BR:
aalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
109432314
Spliceosome [BR:
aalb03041
]
Complex B
Other components
Prp19-related factors
109432314
Complex C
109432314
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
TPR_14
HAT_PRP39_C
Suf
TPR_2
TPR_12
TPR_8
Mad3_BUB1_I
TPR_10
RPN7
ARM_TT21_C
ARM_TT21
TPR_7
NRDE-2
SNAP
PPR
DALR_1
DHR-2_Lobe_A
Motif
Other DBs
NCBI-GeneID:
109432314
NCBI-ProteinID:
XP_019564198
LinkDB
All DBs
Position
Unknown
AA seq
864 aa
AA seq
DB search
MPISSEVNLADVFFNEEDLPYEEEILRNAYSVKHWMRYVEHKRNAPKFVINTVFERALKE
LPGSYKLWYNYLKTLRRQVKGKCVTDSEYEEVNNAFERALVFMHKMPRIWMDYCAFMTGQ
CRITRTRQVFDRALRALPITQHQRIWPLYLQFLGKFDIPETAVRVWRRYLKLCPEDAEEY
VEFLTGIGHLDEAAQQLASIVDNENFVSKHGKSNHQLWNELCELISKNPDKVHSLNVDAI
IRGGLRRYTDQLGHLWNSLADYYVRSGLFDRARDIYEEAIQTVTTVRDFSQVFDAYAQFE
ELSLSKVMEEMAKNPTPTEADEIDVELLMARFEYLMERRLLLLNSVLLRQNPHNVAEWHK
RVELYEGKPHEIINTYTEAVHTVQPKLAVGKLYTLWVEFAKFYEKNKQLDDARIVFEKAV
QVDYLKVDELASVWCEWAEMEIRAENFDNALKIMQRATAMPKRKVAYHDDTETVQMRVYK
SLKLWSMYADLEESFGTFQTCKQVYDRIIDLKICTPQIIINYGLFLEEHNYFEEAFKAYE
KGISLFKWPNVYDIWNTYLTKFLKRYGGQKLERARDLFEQCLDGCPPELAKNLYLLYAKL
EEDHGLARHAMAVYERATTAVKEDEAFAMFNLYIKKAAEIYGIPRTRQIYEKAIEVLPEA
QSRQMCSLFAEMETKLGEIDRARAIYAHCSQMCDPRITADFWQTWKEFEIRHGNEDTMRE
MLRIKRSIQATYNTQINMMSATLINSAVTGAGGTEPRDAMRALEAKAAETSARAIAAVGA
SGGNIMFVRGETQGGSKKEDKVVNPDEIDIDDDDEEDDDEEAEGEEGAEEEDVSKKMPVE
KQTIPSKLFGSLRREEEEDDEDGE
NT seq
2595 nt
NT seq
+upstream
nt +downstream
nt
atgccgatttcgtcggaagtgaatctggcggatgtattctttaacgaggaagacctcccg
tacgaggaggaaatcctccgcaacgcgtactcggtcaagcactggatgcgctacgtggaa
cacaaacggaacgcgcccaagttcgtgatcaacacggtgttcgagcgggcactcaaggaa
ctgcccggatcgtacaagctgtggtacaattatttgaaaacgctgcgacggcaggtcaag
gggaagtgcgtgaccgattcggagtacgaggaggtgaacaatgctttcgagcgagcgctg
gtgttcatgcacaaaatgccacggatttggatggattactgcgcgtttatgacggggcag
tgtcgaattacgcggacccggcaggtgttcgatagggcgttgagggctctgccgattacg
cagcatcagagaatttggccactgtatttgcagtttctggggaagtttgacatcccggag
acggcggttcgggtttggcggaggtatttaaagctttgtccggaggatgcggaggagtat
gtggagtttttgacggggatcgggcatctggatgaggcggcgcagcagttggccagcatc
gtggacaatgagaactttgtttcgaagcacgggaaatcgaatcatcagctgtggaacgag
ttgtgtgagctgatttcgaagaatccggataaggtgcactcgctgaatgtggacgcaatt
attcggggagggttgagacggtacacggatcagctggggcatttgtggaactcgctggcg
gattactacgtgagaagcggattgttcgatagggcgagggatatctacgaggaagctatt
caaaccgtaacgactgtacgggacttcagtcaggtgtttgatgcgtacgctcagtttgaa
gagctaagtttgagcaaggtgatggaagaaatggccaagaatccgactccgacggaagca
gacgaaatcgacgtggaattgctgatggcgcggtttgaatatcttatggaacgtcgattg
ctgttgttgaacagtgttttgctccgacagaatccacacaatgtagctgagtggcataaa
cgcgttgaactgtacgaaggaaagcctcatgagataatcaacacgtacacggaagctgtc
cacacggtgcaaccgaagctggcagtgggaaagttgtatacgctttgggtagaattcgct
aaattctacgaaaagaacaaacagttggacgatgcccggattgtgtttgagaaagcggtt
caagttgattacctcaaggtggatgaactggccagcgtttggtgcgagtgggccgagatg
gagatccgcgcggaaaatttcgacaatgcgctgaaaatcatgcaaagagccacagccatg
cccaaacggaaggtggcctatcacgacgatacggaaacggttcaaatgcgagtgtacaaa
tcgctgaagctctggtccatgtacgccgatctggaggaatcttttggaaccttccaaacc
tgcaagcaagtttacgatcgaatcattgatttgaagatttgcacccctcaaatcatcatc
aactatgggttgttcctggaagaacacaattactttgaggaagcattcaaggcctacgag
aaaggcatctcactctttaaatggccgaacgtgtacgacatctggaacacctatctgacc
aagttcctcaaacgttacggcggacagaagctcgaacgcgcacgtgacttgttcgaacaa
tgcctcgacggatgtcccccggaactcgccaagaacctgtaccttctctacgccaaactc
gaagaagaccatggcctcgcccgccacgccatggccgtctacgaacgagccacgaccgcc
gtcaaagaggacgaagcgttcgccatgttcaatctctacatcaagaaagccgccgaaatc
tacggaattccccggacgcgccagatctacgagaaggccatcgaggtccttccagaagcc
cagtcgcgccagatgtgttcccttttcgccgagatggaaaccaaactcggtgaaatcgat
cgagcccgggccatctacgcgcactgcagtcaaatgtgcgaccccaggataacggccgac
ttctggcagacgtggaaggagttcgaaatccgccacggcaacgaggacaccatgcgggag
atgcttcggatcaagcgttcgatccaggcgacatacaacacccagatcaacatgatgtcg
gccacgttgatcaactcggcggtgaccggtgccggtggtacggaaccgcgggatgccatg
cgggcgctggaggccaaggcggcagaaaccagcgccagagcgattgcggcggttggagcc
agcggggggaacatcatgttcgtgcggggggagacccaagggggatcgaagaaggaggac
aaggtggtcaatccggacgaaatcgacatcgacgacgacgacgaggaggatgatgatgag
gaagctgaaggtgaagaaggtgccgaggaggaagatgttagcaagaaaatgcccgtcgag
aagcagacgattccatcgaaactatttggaagtttgcggcgagaggaagaggaggacgac
gaggatggtgagtag
DBGET
integrated database retrieval system
