Aliiphycobium algicola: U5922_006125
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Entry
U5922_006125 CDS
T11630
Symbol
ligA
Name
(GenBank) NAD-dependent DNA ligase LigA
Organism
aalc Aliiphycobium algicola
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_ligase_aden
OB_DNA_ligase
Nlig-Ia
DNA_ligase_ZBD
BRCT
HHH_2
PTCB-BRCT
HHH_5
EspG
Motif
Other DBs
NCBI-ProteinID:
XHP79717
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Position
1076898..1079120
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AA seq
740 aa
AA seq
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MLNEAEARAELARLADEIAAANLAYHQDDAPELSDADYDALKRRNSAIEARFPALKREDS
PSEQVGAAPAEGFGKITHTVRMLSLSNAFDDADVRDFVDSIRRYLGTDAAIVFTAEPKID
GLSLSLRYEDGALISAATRGDGAVGENVTANAREIGDIPQILSGAPEVLEVRGEVYMSHA
DFEALNARHEARGGKTFANPRNAAAGSLRQLDAAITRARPLKFFAYAWGQLSEPLAETQM
GAIERLGALGFSVNPLTKLCHGPEEMIAHYRAIEAQRATLGYDIDGVVYKVDDLALQHRL
GFRSTTPRWAIAHKFPAELAWTRLEAIDIQVGRTGALSPVARLSPVTVGGVVVSNATLHN
EDYIAGRSSSGEEIRDGKDIRVGDWVQVYRAGDVIPKLADVDLSKRPEGAALYAFPETCP
ECGSAAVREEGDAVRRCTGGLICPAQAVEKLKHFVSRKAFDIEGLGAKQVEAFYHDDTLP
IREPADIFTLKARDAKALAKLKNREGWGETSARNLFDAIEDKRDIPLERLIFGLGIRHVG
EVAAQDLARHYGAWASMAEALDLARPAALAHRAADEAAQAERAAAQAQSRRARLSEARTA
AIATCEVPEGARAAWDDLISADGIGPVLALSLSDAFANSHERAAFDALLTHLTPLAPKAR
ASESPVAGKTLVFTGTLEKMTRAEAKARAEALGAKVAGSVSAKTDLLIAGPGAGSKAKKA
VSLGIEMIDEDGWLELIEGL
NT seq
2223 nt
NT seq
+upstream
nt +downstream
nt
atgctgaacgaggccgaggcgcgcgcggaactggcgcggctcgcggatgagatcgcggcg
gcgaatttggcctatcatcaggacgacgcgccagaactttccgatgccgattatgacgct
ctgaaacgacgaaattcggcaattgaggcgcgattccccgccctgaaacgggaggatagc
ccaagtgagcaggttggcgcggcccccgcagaaggctttggcaaaatcacccatacggtg
cggatgctatcgctttccaacgcatttgatgacgcggatgtgcgtgatttcgtggacagt
attcggcgttatctggggactgacgcggcgattgtctttactgccgagccaaagatcgac
gggttgagcctgagcctgcgttatgaagacggtgcgctgatttcggcggcaacgcgcggc
gatggggcggtgggcgagaatgtcaccgccaatgcgcgcgagatcggggatatcccgcaa
atcttgagcggcgcaccggaggtgcttgaggtgcgcggcgaagtttacatgagccatgcg
gatttcgaagcgttgaatgcacgccatgaagcacggggcggcaagacatttgccaaccca
cgcaacgccgccgccggatcgctgcgccagcttgatgcggcaatcacccgcgcccggcct
ttgaaattctttgcctatgcctgggggcagctttccgaaccgctggcggaaacgcagatg
ggcgcgattgagcggcttggtgcgcttgggttttcggtcaacccgctgaccaagctatgt
catggcccggaagagatgatcgcccattaccgtgccatcgaggcgcagcgcgcgacgctg
gggtatgatatcgacggggtggtttacaaggtcgacgacctcgccttgcaacaccggctt
ggatttcgctcgaccacgccacgctgggcgattgcgcacaagtttccggccgagctcgcc
tggacccggttggaggcgattgacattcaggtgggccgcaccggcgcgctttcgccggtg
gcgcggctcagcccggtgacggtgggcggcgtggtggtctctaacgcgacgttgcataac
gaggattacatcgccgggcgttcgtcttcgggtgaggaaatccgcgacggtaaggatatt
cgcgtcggtgactgggtgcaggtttaccgcgcgggggatgtgattccgaaactggcggat
gtggacctgtcaaagcggcccgagggggcggcgctctatgcgtttccagaaacctgcccg
gaatgcggctctgcggcggtgcgcgaggagggcgatgcagtgcgtcgctgcaccggcggg
ctgatctgcccggcgcaggcggtggaaaagttgaagcatttcgtttcgcgcaaggcgttt
gacatcgaagggcttggcgcgaagcaggtagaggcattttaccatgacgacacgctgcca
atccgcgagccggcggatatttttacgctgaaggcgcgcgacgccaaggcgcttgccaaa
ctgaaaaaccgtgagggttggggcgaaacatcggcgcgaaaccttttcgacgccatcgag
gacaagcgcgatataccgttggaacggctgatttttgggctgggcattcgccatgtgggc
gaggtcgcggcgcaggatctggcgcggcactatggggcttgggcgagcatggcagaggcg
cttgatctggcgcgccccgccgcattggcacatcgcgccgcggatgaagcggcgcaggcc
gagcgtgcggcggcacaagcgcaaagtcggcgcgcacgactgtcagaagcgcggacggcg
gccatcgcgacgtgcgaggtgcccgaaggggcgcgggccgcctgggacgatctgatcagt
gccgacgggatcggcccggtgctggccctgtcgctttcggatgctttcgcaaacagccat
gagcgcgcggcgtttgatgcgctgctcactcatctgacgccgcttgccccaaaagcgcgc
gccagcgaaagcccggtggcgggcaagacactggtgtttaccggcacgcttgagaaaatg
acacgtgccgaggcaaaggcgcgggcggaggcattgggcgccaaggtggccgggtcggtt
tcggccaagaccgatcttttgattgccgggccgggggcgggctcaaaggccaagaaagcc
gtgagccttgggatcgagatgattgacgaggatggctggctggagctgatcgaggggtta
tga
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