Alteromonas algae: ACOJRU_04720
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Entry
ACOJRU_04720 CDS
T11409
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K10941
sigma-54 dependent transcriptional regulator, flagellar regulatory protein
Organism
aale Alteromonas algae
Pathway
aale02020
Two-component system
aale02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
aale00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
ACOJRU_04720
09140 Cellular Processes
09145 Cellular community - prokaryotes
05111 Biofilm formation - Vibrio cholerae
ACOJRU_04720
02025 Biofilm formation - Pseudomonas aeruginosa
ACOJRU_04720
09142 Cell motility
02040 Flagellar assembly
ACOJRU_04720
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
aale03000
]
ACOJRU_04720
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
aale02035
]
ACOJRU_04720
Transcription factors [BR:
aale03000
]
Prokaryotic type
Helix-turn-helix
Other families
ACOJRU_04720
Bacterial motility proteins [BR:
aale02035
]
Flagellar system
Flagellar assembly proteins
Others
ACOJRU_04720
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma54_activat
AAA_lid_14
FleQ
Sigma54_activ_2
HTH_8
AAA_5
HTH_50
AAA_16
Mg_chelatase
bpMoxR
AAA
AAA_19
AAA_7
AAA_2
Motif
Other DBs
NCBI-ProteinID:
XQM97906
LinkDB
All DBs
Position
1063508..1064980
Genome browser
AA seq
490 aa
AA seq
DB search
MKDILLVSDNQELIKSLETIVAFLGESYQSRSFSTCESFLNERGADSVLIDSADNATMNK
LVAQFPSVPFVALVSGAVEISAEHNLVSVVSLPLTYPVLTQAIHRCQEYSRRKPGLSRLG
NAKTRLFRSLVGQSEQIQIVRRLVEQVAPTEATVLILGESGTGKEVVARNVHFFSERKDG
PFIPVNCGAIPGELLESELFGHEKGAFTGAISARKGRFELAEGGTLFLDEIGDMPLQMQV
KLLRVLQERMFERVGGNKPIKCNVRIIAATHRNLDVMIQEDKFREDLYYRLNVFPIDSPA
LRQRKDDIPLLLQELNSRIQGDGVDGVHFTERAIASLMEHEWAGNVRELSNLVERLTILY
PGQIVDVADLPAKYQYGDVDPYEPDYPEELLERDAFNELFAEAAAQEPYDDSEEQEQELV
VATALPEEGVNLKEYLSELEINLIMQALDKQDWVVARAADKLGMRRTTLVEKMRKYEIAR
AEDLSSTSGN
NT seq
1473 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatatcttgctggttagtgataatcaggaactcattaaaagcttagaaactatt
gtcgcctttttgggtgaatcatatcaatcgcgctctttttcgacgtgcgagagttttctg
aacgaacgtggcgctgattctgtgctaatagacagcgcagacaacgcaacgatgaataaa
ttagtggcacagttcccctctgtgccgttcgtcgcactggtgtctggtgctgttgagatt
tctgctgaacacaaccttgttagtgtggtatcacttcctcttacctatccggtgcttaca
caagccattcaccgctgtcaggaatacagtcgaagaaagccaggtctgagccgattaggt
aatgccaaaacccgattattcagaagtttagtcgggcaaagtgagcaaattcaaatagtg
cgccggttagtagagcaagtcgcgcctaccgaagcgacggtgcttatattgggtgagtcg
ggtactggtaaagaagtggtggctcgaaatgttcactttttttcagagcgcaaagacggg
ccctttattcctgtaaattgcggtgccatcccgggagaactgctagaaagcgaattgttc
gggcatgagaaaggtgcatttacgggggccattagtgcccgaaaaggacgtttcgaactt
gctgagggaggcacgctttttcttgatgaaataggtgatatgcccttacaaatgcaggtt
aagttacttcgtgtattgcaagaaagaatgtttgagcgagtgggtggcaacaagccaata
aagtgtaacgttcgtattatcgcggcgacccacagaaaccttgatgttatgattcaagaa
gataaatttcgtgaagacttgtattaccgccttaatgttttccccattgatagccctgct
cttcgacagcgtaaagacgatatccccttgttactgcaagaattaaatagccgtatacag
ggagatggtgtagacggcgttcactttacagaacgcgctattgcgtcgttaatggagcac
gaatgggctggtaatgtaagagagctatcaaaccttgtcgagcgactgaccattctttat
ccggggcaaatcgtggatgttgccgacctacccgcaaaatatcaatatggcgatgtagac
ccttacgagcctgactatcctgaagagttgctagagcgagatgccttcaatgagttgttt
gccgaggcagctgcacaagagccgtatgatgatagcgaagagcaagaacaagaacttgtt
gtcgcgacagcgcttcccgaagagggagtaaatttaaaagagtacctttcagagcttgaa
attaacctcatcatgcaagcgttagacaaacaagattgggttgttgctcgcgccgcagac
aaattaggaatgagaagaacaaccctcgtcgaaaaaatgcgtaaatatgagattgcgcgc
gctgaagatttatcatcaacgtcaggtaattga
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