Alteromonas algae: ACOJRU_07915
Help
Entry
ACOJRU_07915 CDS
T11409
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
aale Alteromonas algae
Pathway
aale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACOJRU_07915 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aale03400
]
ACOJRU_07915 (recC)
Enzymes [BR:
aale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACOJRU_07915 (recC)
DNA repair and recombination proteins [BR:
aale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACOJRU_07915 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Pro-kuma_activ
Motif
Other DBs
NCBI-ProteinID:
XQM98488
LinkDB
All DBs
Position
1744996..1748529
Genome browser
AA seq
1177 aa
AA seq
DB search
MLALYPSNKLEHLSFLLTTLVKQQPTAVFTPETILVESPGMQHWVSMQLANEQGVSMNID
FPLPVRFMWNTARTVLGSDTVPKQSPYRREVLTWRIDNILQDEALMEKEAFIHVKQYWER
AGTEQEQGVQRLQLATALADVYEQYLLYRPDWLFAWERNERVVFDDMEVWQSEIWRVLAA
SQPLHPARLHHMALEALQDGHIPANLPNRIIVFAINTMAPQLIAFFDALAEHIDIHIFHL
NPSVNYWGDAKSDSELAKQLRMEGLEKWMEHEQSNPLLGNLGKQGRELFNLLTDLDTFEI
SAFDAPSMNEAVNGQDSPSLLARIHDDILHAAPAVPRADADVRDEDDSITIMCAHSALRE
VQVLHDHLLHWLSKDKTRTPSDIVVMCPAIENYAPFVDAVFHRVGTKALHGSGLTRLPCS
IADRSPMDAEPLIAAYMALLQLPDSRFGVSDIMDYLQLDAVQKRFSVSQDDIDQMAVWLK
QAHIHWGLNSEHKSAVSEGVTEQDTYSWWWGIRRMLMGMLAPDTEVVVSDVLTIPDVEGQ
SVLTLGKLVQVIDLLGQFANDLTTPRTPEMWARDLIELRDACFMPISEQEQSWDLIAKVA
ADLAARCEEAGYEHTLSLRQVRDLLLNRFSSPDAGNHFMTGQVTVCSMLPMRSIPFKKVC
ILGLNDSEFPRKSTPLGLDLMAGPARRIGDRSRRLEDRYLFLEAIISCRDGLYLSYQGND
VKNNSERQPSLVLAEFLDMLQEGYMVNVSRYVKHAPLHPFSESAFTGVLPSYETGWLRLA
DALRQTTHVQGNDNVDNDNTDRLCTASHATASSLLSLDDDQHERLSGMQVARAFKDPLAY
FSIQRLGVNLQQSFTLLENSEPFETNALVRYQVLDAIFASPHGNTQSDANDNYSEQVIAF
AAMRGDIPANPVAQEELEMWRDGAAALTQAMGPHDVDAKSASFTGQHITFTASAFEGADS
LMLLCAGKINDTRALHYFISQLVFCSSETSTSYSGYPLDVFYCDWEKGETTLIKRRFKAF
EREVAQQILLFIERLYIAIYTTPTPLYRSAFNDLVPGKRNSQSATLVKEIKPERFGEVVE
ALLAQSETVTNNGGARNDVSENSTTLINNVTSLFDDFDAERFLKNWLQSSGPFTSDIANN
PYIKWLFPQGIAWTDLPYTQGFILFAMVINAADEETL
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
ttgctagcgctttatccctcgaacaagttagaacatctcagttttctgttaacgaccttg
gttaaacagcagcctacggcagtgtttacacccgaaactattttggttgaaagcccagga
atgcaacattgggttagtatgcaacttgcaaatgagcaaggggtgtcgatgaacatcgac
tttccattaccggtgcggtttatgtggaatacggcgcgcacggtattgggcagtgacacc
gtaccaaaacagtcgccttatcggcgagaggtgcttacatggcgcatcgataatatttta
caagatgaagcgttaatggaaaaagaggcttttattcatgtaaaacagtattgggaaagg
gcgggcacggaacaggaacaaggcgtgcagcgcctgcaactcgcaacggcgctggcggat
gtttacgaacaatacttgctatatcgtcctgactggctatttgcttgggagcgcaatgag
cgggtcgttttcgatgatatggaagtgtggcaaagcgaaatatggcgtgtactggcagca
tcacaaccacttcatccagctcgactacatcatatggcactcgaggcgctgcaagacggt
catatcccagcgaatttacccaatcgaattatcgtatttgcaattaatacgatggcccct
cagttaattgcatttttcgatgcgctagcagagcacatcgatattcatatttttcatcta
aaccccagcgtgaattattggggagatgctaaaagcgacagtgaattggcaaagcaattg
cgaatggaggggctcgaaaaatggatggagcacgagcaaagtaacccgctgttaggcaat
ttagggaagcaaggaagagagttatttaatttattaactgacttagatacgtttgaaata
agtgccttcgatgccccctctatgaatgaggccgtgaatggacaggatagcccttcactg
ttggcgcgtattcatgatgatatattgcatgccgcgccagcagtgccgcgtgcagacgcc
gacgtaagagatgaagacgatagcattacgataatgtgtgcgcattcagcgctacgggaa
gtacaggttttacacgaccatttattgcattggttatcaaaagataaaacccgaacgcca
tcagacattgtagtgatgtgcccagcaattgaaaattatgccccttttgttgatgcggtt
tttcaccgtgtgggcactaaggcgcttcatggcagcgggctaacacgcctaccttgctct
attgccgatagaagccctatggatgcagagcctctgattgcggcatacatggcgttgtta
cagcttcctgatagccgctttggcgtgtcagatatcatggattatttgcagcttgatgcc
gtacagaaacgcttttcggtttcacaagatgatattgatcagatggcggtgtggcttaag
caggcacatatccattggggattaaacagcgagcataaatcggcagtgtcggaaggtgta
accgagcaagacacctacagttggtggtggggcatacgccgcatgctcatgggcatgctg
gcgcccgacacagaggtggtcgttagtgatgtgctaacaattccggacgttgaaggacaa
agtgtacttacgcttggaaagttggtgcaggtaatcgacttactagggcaatttgcgaat
gacttaacgacacctcgcacgccagagatgtgggcaagagacttaattgaactgcgcgat
gcgtgctttatgccgataagtgagcaagaacagagttgggacctgattgcaaaagtagcc
gctgatttagctgcccgttgcgaagaggccggttatgaacacacgctaagtctaagacag
gtaagagatttactccttaatcgcttttcatcgcccgatgcgggcaaccactttatgacc
gggcaggtaaccgtatgctctatgctgcctatgcgcagtattccctttaaaaaagtgtgt
atcttgggcctaaatgacagtgaatttccacgtaaatccacaccactcgggttagattta
atggcaggcccagcgcggcgtatcggcgaccgctcaagacgactagaggaccgatatcta
tttttagaagcgattatctcgtgccgagatggcctgtaccttagttatcaaggtaacgac
gttaaaaacaacagtgagcgtcagcctagtctcgtgttagctgagtttcttgacatgttg
caagaaggctacatggttaacgtttcacgttatgtaaagcatgcaccgttgcacccgttt
agcgaaagtgcatttacaggagtgttaccaagttatgaaactgggtggctaaggcttgca
gatgcactaaggcaaacaacgcacgtgcagggtaatgataacgttgataatgataatacc
gaccggttgtgtacagcgagtcacgcgactgcatcgtccttgctgtcgcttgatgatgat
cagcatgagcggttgtcgggcatgcaagttgcgagggcgtttaaagacccgctcgcctat
ttttcaattcagcgtttaggcgtgaatctgcaacaatcgttcactttgcttgaaaacagt
gaaccctttgagactaatgcgttagttcgttatcaagtactcgatgcaatttttgcctct
ccccatggcaatacgcaaagcgacgctaacgacaactacagtgaacaagtgattgcattt
gcagcaatgcgcggcgatatcccagctaacccggtcgcgcaagaagaactcgaaatgtgg
agagacggagcggcggcattgacacaggcaatgggccctcacgacgtagacgctaagagc
gcaagttttacggggcaacatatcacattcacggccagtgcttttgaaggcgcagacagt
ttgatgttgctatgtgcaggtaaaataaatgacactcgagcactgcactattttatctct
caacttgtcttttgtagcagcgaaacgagcacgtcatatagtggttatccattagacgta
ttctattgtgattgggaaaaaggtgagaccaccttgattaaacgccgtttcaaggcattt
gagagagaggttgcacaacaaatattgctctttattgaacgtttatatatcgctatttac
acgacaccgacaccgctgtaccgaagcgcattcaacgacctcgtgccaggtaaacgcaat
tctcaaagcgccacactggttaaagaaataaaacccgaacgctttggtgaggttgtcgag
gcgttattagcgcaatcggaaacggtgactaacaatgggggagcgcgtaatgacgtgtca
gagaattcgaccactctcattaataatgtcacctcgctatttgatgatttcgatgccgaa
cgttttcttaaaaattggcttcaatcctcgggtccctttacttctgacatagccaataac
ccttatattaagtggctattcccgcagggcattgcgtggactgacttaccctatacacag
ggctttattttgtttgctatggtgataaacgcagccgatgaggaaacgttatga
DBGET
integrated database retrieval system
