Alteromonas algae: ACOJRU_07925
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Entry
ACOJRU_07925 CDS
T11409
Symbol
recD
Name
(GenBank) exodeoxyribonuclease V subunit alpha
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
aale Alteromonas algae
Pathway
aale03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aale00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACOJRU_07925 (recD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aale03400
]
ACOJRU_07925 (recD)
Enzymes [BR:
aale01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACOJRU_07925 (recD)
DNA repair and recombination proteins [BR:
aale03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACOJRU_07925 (recD)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_19
AAA_30
UvrD_C_2
Viral_helicase1
AAA_11
NAT10_TcmA_helicase
UvrD-helicase
AAA_22
SH3_13
SLFN-g3_helicase
UvrD_C
PhoH
RecD_N
Terminase_6N
DEAD
AAA_12
ResIII
PglZ_C
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
XQM98490
LinkDB
All DBs
Position
1752449..1754437
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AA seq
662 aa
AA seq
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MSERKMNFSASFEQLAGIEAIDKFVAAEFTPLSVLNEAQNGVWLHALVTLSFMQRNGHSC
LPVNAIAGKTFFDDISRENETRSGEQKANDGNENTAASHVVVKKGYTFPSLTVVIGTIKK
ALEVKDISSLFVYHSGRLYSRRYFEFEQEVARQIHKRTRFSPLSDTASSNVKALWPAMFP
TSEGASQDWQQVAVAKSLVQRFSVINGGPGTGKTYTVLRLLLALLASDDSLNIVLAAPTG
KAQQRMTESIVASIEGLKGSVNDTLLNLVPTQAVTLHRLLGLREHTIATRHNALNPLALD
VLIVDEASMVDLALMTRIMRALPDHAALYFIGDADQLPAVELGNVLEQLVAKADSKEEGS
EERVGAVPTLLRQHIATLCPHLPLLPVDEKAKTWVHTLQASQRFKGQIAAVATAIQQGQA
QQALEAIDSGKPSLQSHTRDASALKDGVYLWDELSVNTATLQRLAKESFLPIFESKDAKQ
ALAQLNRVRWLTPVRKGGMGVEGLNALVFDAIKHKILRREGSFYQGQPIMIIKNNHPQRL
SNGEVGIIWPDDSGKLYAWFETQDGALRYISLSRVPQFETVYAMTIHKSQGSEFNHVILL
LPKPESEKAAGLFHRGLVYTGLTRAKEGCLLIASASTFCTMIDQNDKRHSGLSEAINTLS
VD
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacgtaaaatgaatttcagcgccagttttgagcaattggcgggcattgaagcg
atagataaatttgttgctgctgaatttacgccgctgtctgtgttaaatgaagcgcaaaac
ggtgtttggttgcatgcactggtgacactttcttttatgcagcgaaacggccatagctgt
ctgccggtgaatgctattgctggcaaaacgttctttgatgacataagccgcgagaatgaa
acacgtagcggtgaacaaaaagccaatgacggtaatgaaaatactgctgcaagccatgtg
gtggtaaaaaaaggctatacttttccttcgctaaccgtggtgattggtaccataaagaaa
gcgcttgaggtgaaggatataagctcactctttgtataccatagcggaagattgtacagt
cgtcgctattttgaatttgaacaagaagtcgctcggcaaatacataaacgtacacgattt
tccccgttaagcgacacggcatcatcaaatgttaaggcgttatggcctgctatgtttcct
acttcggaaggcgcatcccaagattggcaacaagtagcagtagcaaaaagccttgtacaa
cgcttcagtgttataaacggtggtccgggaacgggaaaaacttacaccgtactgcgctta
ttacttgcgcttttagccagtgatgacagcttaaacatcgtattggcagcgccaacgggt
aaagcgcaacagcgaatgacagagtctattgtggcgagtatcgaaggccttaaagggtcg
gtaaacgacacacttttaaaccttgtgccgacacaggcagtaacgctccatcgtttgctt
ggcttacgtgagcacaccatcgctacacggcataatgccctaaacccgcttgcgttagat
gtacttattgtcgatgaagctagcatggtcgaccttgccctcatgacacgtattatgcgt
gctttacccgatcatgctgcattatattttattggcgatgccgaccaacttccagcagta
gagctaggcaatgtactggaacagttggttgcaaaggcagatagtaaagaagagggtagc
gaggaaagagtcggtgctgtacctacgttattacgtcaacatattgccacgctttgtccg
catttacctttgttgccggtggatgaaaaagcaaaaacgtgggtgcatacgttgcaagct
tcacaacgcttcaaaggtcagattgccgcagttgcaacagcgattcagcaaggccaagcg
caacaggcgctagaggcgatagatagtggcaaaccaagcctacagagccatactcgtgac
gccagcgcgttaaaagatggtgtgtatctatgggatgaattatcggtgaataccgcaacg
ctgcaacggttagcaaaagaaagcttcttacctatttttgaatcaaaagacgcaaagcag
gcgttagcccaacttaatcgtgttcgatggttaaccccagttcgaaaaggcggtatgggc
gtcgaagggttaaatgcactggtatttgatgctatcaaacataaaatcttgcgaagagag
ggtagcttctaccaaggccaacctattatgattataaaaaataatcaccctcagcgtttg
tcaaatggtgaggttggcataatatggcccgacgattcaggcaaactgtatgcgtggttt
gaaacacaagacggcgcgctacggtatatttcgctgtcacgtgtgccacagtttgagacc
gtttatgcgatgactattcataaatctcaaggatctgagtttaaccatgtgatattactt
ctacctaagcccgaaagtgaaaaagcggcagggttatttcaccgaggcttggtatatacg
gggttaacgagagcaaaagaggggtgtttgttaatcgccagcgcgtcaacattttgcaca
atgatagaccaaaatgataaacgtcactcagggctgtctgaggcaataaatacgctgtca
gttgactaa
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